DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SVDSKVPSL
Uniprot ID:
Q8TC71
Source protein:
Mitochondria-eating protein
Source gene:
SPATA18
Class:
DEG_COP1_1
Location:
94:102
E3 ligase:
COP1
DEGRON score:
0.9434
ASA_SCORE:
71.8444
COIL:
0.7277
CONS_SCORE:
0.6746
DSS_SCORE:
0.4856
HELIX:
0.236
FCONS_SCORE:
1.0336
RIG_SCORE:
0.6744
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D107N
TCGA-99-8025
LUAD
TCGA
SVDSKVPSL
DEG_COP1_1
0.1944
p.D107N
DO24255
LUAD
ICGC
SVDSKVPSL
DEG_COP1_1
0.1944
p.S101F
TCGA-DU-6392
LGG
TCGA
SVDSKVPSL
DEG_COP1_1
0.7982
p.S101F
DO22237
LGG
ICGC
SVDSKVPSL
DEG_COP1_1
0.7982
p.G92R
TCGA-EJ-A8FP
PRAD
TCGA
SVDSKVPSL
DEG_COP1_1
0.2778
p.G92R
DO51331
PRAD
ICGC
SVDSKVPSL
DEG_COP1_1
0.2778
p.S85F
TCGA-FW-A3R5
SKCM
TCGA
SVDSKVPSL
DEG_COP1_1
0.0833
p.S85F
DO37406
SKCM
ICGC
SVDSKVPSL
DEG_COP1_1
0.0833
p.S101P
DO227844
COCA
ICGC
SVDSKVPSL
DEG_COP1_1
0.6752
p.A84S
DO229015
LICA
ICGC
SVDSKVPSL
DEG_COP1_1
0.0556
p.D107Y
DO229006
LICA
ICGC
SVDSKVPSL
DEG_COP1_1
0.1944
p.H111N
DO230974
LUSC
ICGC
SVDSKVPSL
DEG_COP1_1
0.0833
p.H111N
DO224632
LUSC
ICGC
SVDSKVPSL
DEG_COP1_1
0.0833
p.E109K
DO222550
MELA
ICGC
SVDSKVPSL
DEG_COP1_1
0.1389
p.F86L
SIDM00113
Kidney Carcinoma
GDSC
SVDSKVPSL
DEG_COP1_1
0.1111
p.F86L
ACH-001208
Kidney Cancer
CCLE
SVDSKVPSL
DEG_COP1_1
0.1111
p.F86L
TK10
kidney
COSMIC
SVDSKVPSL
DEG_COP1_1
0.1111
Drug responses associated with SPATA18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVDSKVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TC71
Mitochondria-eating protein
DEG_COP1_1
94:102
SVDSKVPSL
COP1
0.9434
More...