DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SVEQTPKK
Uniprot ID:
P46527
Source protein:
Cyclin-dependent kinase inhibitor 1B
Source gene:
CDKN1B
Class:
DEG_SCF_SKP2-CKS1_1
Location:
183:190
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9325
ASA_SCORE:
93.675
COIL:
0.8121
CONS_SCORE:
0.4598
DSS_SCORE:
0.8411
HELIX:
0.023
FCONS_SCORE:
0.9992
RIG_SCORE:
0.6256
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P191H
TCGA-AP-A051
UCEC
TCGA
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
p.P191H
DO42673
UCEC
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
p.V184M
DO48424
BLCA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.6097
p.I173N
DO9410
COAD
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.0556
p.I200L
DO9876
COAD
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.0556
p.T185I
DO233882
GACA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.7078
p.F181L
DO14566
HNSC
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.2778
p.F181L
DO45211
LIRI
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.2778
p.G192V
DO228974
LICA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.2778
p.G182C
DO229022
LICA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.3056
p.G177V
DO229027
LICA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.A179S
DO229035
LICA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.2222
p.A179S
DO229038
LICA
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.2222
p.N196S
DO26834
LUSC
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.S178F
DO228343
MALY
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.6389
p.K199N
DO223286
UCEC
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.0833
p.K199N
ACH-000991
Colon/Colorectal Cancer
CCLE
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.0833
p.K199N
SNU-81
large_intestine
COSMIC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.0833
p.N197I
DO41235
UCEC
ICGC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1389
p.L193F
SIDM00855
Other Sarcomas
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM00694
Other Solid Cancers
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM00878
Breast Carcinoma
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM00849
Kidney Carcinoma
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM00431
T-Lymphoblastic Leukemia
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM00859
B-Cell Non-Hodgkin's Lymphoma
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.L193F
SIDM01173
Rhabdomyosarcoma
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.G177S
SIDM00041
Gastric Carcinoma
GDSC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.G177S
ACH-002306
Gastric Cancer
CCLE
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.G177S
STS-0421
soft_tissue
COSMIC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.N196I
ACH-000864
Endometrial/Uterine Cancer
CCLE
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
p.N196I
COLO-684
endometrium
COSMIC
SVEQTPKK
DEG_SCF_SKP2-CKS1_1
0.1667
Drug responses associated with CDKN1B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVEQTPKK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P46527
Cyclin-dependent kinase inhibitor 1B
DEG_SCF_SKP2-CKS1_1
183:190
SVEQTPKK
SKP2,CSK1
0.9325
More...