DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SVQTSPVPTP
Uniprot ID:
O43426
Source protein:
Synaptojanin-1
Source gene:
SYNJ1
Class:
DEG_COP1_1
Location:
1341:1350
E3 ligase:
COP1
DEGRON score:
0.9952
ASA_SCORE:
95.33
COIL:
0.9432
CONS_SCORE:
0.3158
DSS_SCORE:
0.5025
HELIX:
0.0179
FCONS_SCORE:
1.0105
RIG_SCORE:
0.6824
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P1343L
TCGA-A5-A0G2
UCEC
TCGA
SVQTSPVPTP
DEG_COP1_1
0.7582
p.P1358L
TCGA-EE-A2MS
SKCM
TCGA
SVQTSPVPTP
DEG_COP1_1
0.1111
p.E1356Q
TCGA-SY-A9G5
BLCA
TCGA
SVQTSPVPTP
DEG_COP1_1
0.1667
p.P1352T
DO228978
LICA
ICGC
SVQTSPVPTP
DEG_COP1_1
0.2778
p.P1348L
DO218874
SKCA
ICGC
SVQTSPVPTP
DEG_COP1_1
0.7582
p.P1350L
DO47281
SKCM
ICGC
SVQTSPVPTP
DEG_COP1_1
0.6471
p.P1350S
DO47281
SKCM
ICGC
SVQTSPVPTP
DEG_COP1_1
0.6752
p.R1354K
DO37782
SKCM
ICGC
SVQTSPVPTP
DEG_COP1_1
0.2222
p.P1348T
DO48665
SKCM
ICGC
SVQTSPVPTP
DEG_COP1_1
0.7031
p.S1360F
DO219487
SKCM
ICGC
SVQTSPVPTP
DEG_COP1_1
0.0556
p.K1337N
DO41746
UCEC
ICGC
SVQTSPVPTP
DEG_COP1_1
0.3333
p.V1345I
SIDM01409
Bladder Carcinoma
GDSC
SVQTSPVPTP
DEG_COP1_1
0.7076
p.E1346Q
SIDM01520
Oral Cavity Carcinoma
GDSC
SVQTSPVPTP
DEG_COP1_1
0.6744
p.I1350S
JVM-3
haematopoietic_and_lymphoid_tissue
COSMIC
SVQTSPVPTP
DEG_COP1_1
0.7341
p.P1346T
SNU-81
large_intestine
COSMIC
SVQTSPVPTP
DEG_COP1_1
0.5919
Drug responses associated with SYNJ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVQTSPVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43426
Synaptojanin-1
DEG_COP1_1
1341:1350
SVQTSPVPTP
COP1
0.9952
More...