DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
SVSPAVPTP
Uniprot ID:
Q5VV67
Source protein:
Peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Source gene:
PPRC1
Class:
DEG_COP1_1
Location:
864:872
E3 ligase:
COP1
DEGRON score:
0.9932
ASA_SCORE:
88.6444
COIL:
0.9676
CONS_SCORE:
0.3244
DSS_SCORE:
0.5591
HELIX:
0.0102
FCONS_SCORE:
0.877
RIG_SCORE:
0.5841
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M875I
TCGA-55-A57B
LUAD
TCGA
SVSPAVPTP
DEG_COP1_1
0.25
p.M875I
DO218929
LUAD
ICGC
SVSPAVPTP
DEG_COP1_1
0.25
p.Q863H
TCGA-B5-A1N2
UCEC
TCGA
SVSPAVPTP
DEG_COP1_1
0.3056
p.Q863H
DO41602
UCEC
ICGC
SVSPAVPTP
DEG_COP1_1
0.3056
p.P872S
TCGA-BG-A0LX
UCEC
TCGA
SVSPAVPTP
DEG_COP1_1
0.6752
p.P872S
DO41919
UCEC
ICGC
SVSPAVPTP
DEG_COP1_1
0.6752
p.A856V
SIDM02021
Esophageal Carcinoma
GDSC
SVSPAVPTP
DEG_COP1_1
0.1111
p.A856V
ACH-001656
Leukemia
CCLE
SVSPAVPTP
DEG_COP1_1
0.1111
p.S866F
SIDM01007
T-Lymphoblastic Leukemia
GDSC
SVSPAVPTP
DEG_COP1_1
0.7982
p.S866F
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
SVSPAVPTP
DEG_COP1_1
0.7982
Drug responses associated with PPRC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of SVSPAVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VV67
Peroxisome proliferator-activated receptor gamma coactivator-related protein 1
DEG_COP1_1
864:872
SVSPAVPTP
COP1
0.9932
More...