DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TADGFAVPEP
Uniprot ID:
Q86XP3
Source protein:
ATP-dependent RNA helicase DDX42
Source gene:
DDX42
Class:
DEG_COP1_1
Location:
919:928
E3 ligase:
COP1
DEGRON score:
0.9699
ASA_SCORE:
70.17
COIL:
0.8641
CONS_SCORE:
0.2652
DSS_SCORE:
0.6594
HELIX:
0.0309
FCONS_SCORE:
0.9202
RIG_SCORE:
0.6825
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K918R
TCGA-56-7822
LUSC
TCGA
TADGFAVPEP
DEG_COP1_1
0.3056
p.K918R
DO26638
LUSC
ICGC
TADGFAVPEP
DEG_COP1_1
0.3056
p.A920V
TCGA-BR-4184
STAD
TCGA
TADGFAVPEP
DEG_COP1_1
0.5825
p.R931H
TCGA-HU-A4GT
STAD
TCGA
TADGFAVPEP
DEG_COP1_1
0.25
p.R931H
DO48020
STAD
ICGC
TADGFAVPEP
DEG_COP1_1
0.25
p.A920T
SIDM00333
Endometrial Carcinoma
GDSC
TADGFAVPEP
DEG_COP1_1
0.6028
p.A920T
ACH-000988
Endometrial/Uterine Cancer
CCLE
TADGFAVPEP
DEG_COP1_1
0.6028
p.A920T
MFE-319
endometrium
COSMIC
TADGFAVPEP
DEG_COP1_1
0.6028
p.T919I
SIDM00527
Colorectal Carcinoma
GDSC
TADGFAVPEP
DEG_COP1_1
0.7078
p.T919I
ACH-000935
Colon/Colorectal Cancer
CCLE
TADGFAVPEP
DEG_COP1_1
0.7078
p.T919I
MDST8
large_intestine
COSMIC
TADGFAVPEP
DEG_COP1_1
0.7078
Drug responses associated with DDX42 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TADGFAVPEP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86XP3
ATP-dependent RNA helicase DDX42
DEG_COP1_1
919:928
TADGFAVPEP
COP1
0.9699
More...