DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TAVSFPVPSM
Uniprot ID:
A7E2V4
Source protein:
Zinc finger SWIM domain-containing protein 8
Source gene:
ZSWIM8
Class:
DEG_COP1_1
Location:
1573:1582
E3 ligase:
COP1
DEGRON score:
0.7399
ASA_SCORE:
68.88
COIL:
0.8959
CONS_SCORE:
0.3828
DSS_SCORE:
0.1824
HELIX:
0.0281
FCONS_SCORE:
0.9227
RIG_SCORE:
0.7362
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y1566C
TCGA-AP-A054
UCEC
TCGA
TAVSFPVPSM
DEG_COP1_1
0.1389
p.Y1566C
DO42256
UCEC
ICGC
TAVSFPVPSM
DEG_COP1_1
0.1389
p.A1588T
TCGA-BK-A6W3
UCEC
TCGA
TAVSFPVPSM
DEG_COP1_1
0.1667
p.A1583T
DO50076
UCEC
ICGC
TAVSFPVPSM
DEG_COP1_1
0.3056
p.V1584I
SIDM00253
Neuroblastoma
GDSC
TAVSFPVPSM
DEG_COP1_1
0.2778
p.V1584I
NB6
autonomic_ganglia
COSMIC
TAVSFPVPSM
DEG_COP1_1
0.2778
p.V1579I
NB6
autonomic_ganglia
COSMIC
TAVSFPVPSM
DEG_COP1_1
0.7076
p.A1564T
VAL
haematopoietic_and_lymphoid_tissue
COSMIC
TAVSFPVPSM
DEG_COP1_1
0.0833
p.Y1586C
GP5d
large_intestine
COSMIC
TAVSFPVPSM
DEG_COP1_1
0.2222
Drug responses associated with ZSWIM8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TAVSFPVPSM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A7E2V4
Zinc finger SWIM domain-containing protein 8
DEG_COP1_1
1573:1582
TAVSFPVPSM
COP1
0.7399
More...