DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TCDEFNGVPSY
Uniprot ID:
Q96BD8
Source protein:
Spindle and kinetochore-associated protein 1
Source gene:
SKA1
Class:
DEG_COP1_1
Location:
141:151
E3 ligase:
COP1
DEGRON score:
0.9789
ASA_SCORE:
46.1364
COIL:
0.3891
CONS_SCORE:
0.6485
DSS_SCORE:
0.2978
HELIX:
0.5902
FCONS_SCORE:
1.2155
RIG_SCORE:
0.8065
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S133R
TCGA-69-7761
LUAD
TCGA
TCDEFNGVPSY
DEG_COP1_1
0.1111
p.S133R
DO23620
LUAD
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.1111
p.M152I
TCGA-A5-A2K5
UCEC
TCGA
TCDEFNGVPSY
DEG_COP1_1
0.3056
p.F145L
TCGA-D1-A16X
UCEC
TCGA
TCDEFNGVPSY
DEG_COP1_1
0.587
p.F145L
DO41799
UCEC
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.587
p.R132I
TCGA-D1-A17Q
UCEC
TCGA
TCDEFNGVPSY
DEG_COP1_1
0.0833
p.R132I
DO41903
UCEC
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.0833
p.R155H
TCGA-DU-6392
LGG
TCGA
TCDEFNGVPSY
DEG_COP1_1
0.2222
p.D158N
DO223732
CESC
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.5833
p.S150L
DO222653
MELA
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.7667
p.R145K
DO32019
OV
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.7237
p.S133N
DO218860
SKCA
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.1111
p.H149Y
DO37881
SKCM
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.7229
p.S142Y
DO37443
SKCM
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.712
p.S142Y
DO42793
UCEC
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.712
p.S139Y
DO42673
UCEC
ICGC
TCDEFNGVPSY
DEG_COP1_1
0.2778
p.E144G
SIDM01619
Endometrial Carcinoma
GDSC
TCDEFNGVPSY
DEG_COP1_1
0.7199
p.E144G
ACH-000984
Endometrial/Uterine Cancer
CCLE
TCDEFNGVPSY
DEG_COP1_1
0.7199
Drug responses associated with SKA1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TCDEFNGVPSY
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96BD8
Spindle and kinetochore-associated protein 1
DEG_COP1_1
141:151
TCDEFNGVPSY
COP1
0.9789
More...