DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TDCATPDFVPEP
Uniprot ID:
Q96JM4
Source protein:
Leucine-rich repeat and IQ domain-containing protein 1
Source gene:
LRRIQ1
Class:
DEG_COP1_1
Location:
127:138
E3 ligase:
COP1
DEGRON score:
0.7674
ASA_SCORE:
97.6
COIL:
0.9013
CONS_SCORE:
0.6176
DSS_SCORE:
0.6213
HELIX:
0.0654
FCONS_SCORE:
0.9463
RIG_SCORE:
0.6801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E137K
TCGA-AO-A03M
BRCA
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.7022
p.E137K
DO2216
BRCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.7022
p.P140H
TCGA-CA-5254
COAD
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.2778
p.P140H
DO8674
COAD
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.2778
p.P140H
ACH-002287
Colon/Colorectal Cancer
CCLE
TDCATPDFVPEP
DEG_COP1_1
0.2778
p.P140H
NCI-H630
large_intestine
COSMIC
TDCATPDFVPEP
DEG_COP1_1
0.2778
p.K126E
TCGA-CG-5721
STAD
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.3056
p.K126E
DO38192
STAD
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.3056
p.E121K
TCGA-FR-A729
SKCM
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.1667
p.E121K
DO48618
SKCM
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.1667
p.M145V
TCGA-G2-A2EL
BLCA
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.1389
p.M145V
DO478
BLCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.1389
p.E118Q
TCGA-KQ-A41R
BLCA
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.0833
p.E118Q
DO223592
BLCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.0833
p.E118Q
DO224565
BRCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.0833
p.E118Q
DO1004
BRCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.0833
p.K126T
TCGA-ND-A4WC
UCS
TCGA
TDCATPDFVPEP
DEG_COP1_1
0.3056
p.D128H
DO217931
BRCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.7688
p.P138A
DO222445
BTCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.6392
p.M123R
DO234179
ESAD
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.2222
p.E120G
DO229346
LAML
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.1389
p.E120G
SIDM00531
Pancreatic Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.1389
p.E120G
HuP-T4
pancreas
COSMIC
TDCATPDFVPEP
DEG_COP1_1
0.1389
p.H148Q
DO231974
LICA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.0556
p.P144T
DO228821
LICA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.1667
p.D146N
DO220879
MELA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.1111
p.M123I
DO232044
ORCA
ICGC
TDCATPDFVPEP
DEG_COP1_1
0.2222
p.F122L
SIDM02027
Colorectal Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.1944
p.S125R
SIDM02027
Colorectal Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.2778
p.H148R
SIDM00238
Ovarian Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.0556
p.H148R
ACH-000947
Ovarian Cancer
CCLE
TDCATPDFVPEP
DEG_COP1_1
0.0556
p.H148R
OVK-18
ovary
COSMIC
TDCATPDFVPEP
DEG_COP1_1
0.0556
p.S139C
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.3056
p.S139C
H513
pleura
COSMIC
TDCATPDFVPEP
DEG_COP1_1
0.3056
p.D146Y
SIDM00508
Squamous Cell Lung Carcinoma
GDSC
TDCATPDFVPEP
DEG_COP1_1
0.1111
p.D146Y
ACH-001489
Lung Cancer
CCLE
TDCATPDFVPEP
DEG_COP1_1
0.1111
p.D146Y
COR-L32
lung
COSMIC
TDCATPDFVPEP
DEG_COP1_1
0.1111
Drug responses associated with LRRIQ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TDCATPDFVPEP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96JM4
Leucine-rich repeat and IQ domain-containing protein 1
DEG_COP1_1
127:138
TDCATPDFVPEP
COP1
0.7674
More...