DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
TDEDVPSGP
Uniprot ID:
P10586
Source protein:
Receptor-type tyrosine-protein phosphatase F
Source gene:
PTPRF
Class:
DEG_COP1_1
Location:
703:711
E3 ligase:
COP1
DEGRON score:
0.9354
ASA_SCORE:
70.2222
COIL:
0.7696
CONS_SCORE:
0.548
DSS_SCORE:
0.574
HELIX:
0.0222
FCONS_SCORE:
1.2662
RIG_SCORE:
0.6593
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E718D
TCGA-AA-3877
COAD
TCGA
TDEDVPSGP
DEG_COP1_1
0.1389
p.E718D
DO7855
COAD
ICGC
TDEDVPSGP
DEG_COP1_1
0.1389
p.P694L
TCGA-B5-A3FC
UCEC
TCGA
TDEDVPSGP
DEG_COP1_1
0.0833
p.P694L
DO41871
UCEC
ICGC
TDEDVPSGP
DEG_COP1_1
0.0833
p.D704N
TCGA-EO-A22U
UCEC
TCGA
TDEDVPSGP
DEG_COP1_1
0.6932
p.D704N
DO43755
UCEC
ICGC
TDEDVPSGP
DEG_COP1_1
0.6932
p.G693S
DO230336
COCA
ICGC
TDEDVPSGP
DEG_COP1_1
0.0556
p.D704Y
DO229029
LICA
ICGC
TDEDVPSGP
DEG_COP1_1
0.7325
p.P712Q
DO50672
ORCA
ICGC
TDEDVPSGP
DEG_COP1_1
0.3056
p.P711T
ACH-001628
Ovarian Cancer
CCLE
TDEDVPSGP
DEG_COP1_1
0.7031
p.V717G
HCC38
breast
COSMIC
TDEDVPSGP
DEG_COP1_1
0.1667
Drug responses associated with PTPRF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TDEDVPSGP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10586
Receptor-type tyrosine-protein phosphatase F
DEG_COP1_1
703:711
TDEDVPSGP
COP1
0.9354
More...