DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TDLPENEVPEV
Uniprot ID:
Q8N9W8
Source protein:
Golgi associated RAB2 interactor protein 2
Source gene:
GARIN2
Class:
DEG_COP1_1
Location:
247:257
E3 ligase:
COP1
DEGRON score:
0.995
ASA_SCORE:
77.6727
COIL:
0.7665
CONS_SCORE:
0.7191
DSS_SCORE:
0.5184
HELIX:
0.0705
FCONS_SCORE:
0.8913
RIG_SCORE:
0.7836
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E253K
TCGA-UY-A9PF
BLCA
TCGA
TDLPENEVPEV
DEG_COP1_1
0.591
p.E256D
SIDM00815
Ovarian Carcinoma
GDSC
TDLPENEVPEV
DEG_COP1_1
0.5647
p.P258L
TCGA-F4-6570
COAD
TCGA
TDLPENEVPEV
DEG_COP1_1
0.3056
p.D259N
SIDM00251
Gastric Carcinoma
GDSC
TDLPENEVPEV
DEG_COP1_1
0.2778
p.D242N
TCGA-AJ-A3OJ
UCEC
TCGA
TDLPENEVPEV
DEG_COP1_1
0.1944
p.D242N
SIDM01263
T-Lymphoblastic Leukemia
GDSC
TDLPENEVPEV
DEG_COP1_1
0.1944
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Drug responses associated with GARIN2 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TDLPENEVPEV
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9W8
Golgi associated RAB2 interactor protein 2
DEG_COP1_1
247:257
TDLPENEVPEV
COP1
0.995
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