DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TDQKTVPTP
Uniprot ID:
Q8TCU4
Source protein:
Alstrom syndrome protein 1
Source gene:
ALMS1
Class:
DEG_COP1_1
Location:
988:996
E3 ligase:
COP1
DEGRON score:
0.9966
ASA_SCORE:
99.4556
COIL:
0.9309
CONS_SCORE:
0.5452
DSS_SCORE:
0.5936
HELIX:
0.0203
FCONS_SCORE:
1.0788
RIG_SCORE:
0.6689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P998L
TCGA-FW-A3R5
SKCM
TCGA
TDQKTVPTP
DEG_COP1_1
0.2778
p.P998L
DO37406
SKCM
ICGC
TDQKTVPTP
DEG_COP1_1
0.2778
p.I999L
DO222601
ESCA
ICGC
TDQKTVPTP
DEG_COP1_1
0.25
p.P1000Q
DO37770
SKCM
ICGC
TDQKTVPTP
DEG_COP1_1
0.2222
p.L984P
DO51795
STAD
ICGC
TDQKTVPTP
DEG_COP1_1
0.2222
p.S1000L
SIDM00381
Cervical Carcinoma
GDSC
TDQKTVPTP
DEG_COP1_1
0.2222
p.S1000L
SKG-IIIa
cervix
COSMIC
TDQKTVPTP
DEG_COP1_1
0.2222
p.S999L
ACH-002020
Cervical Cancer
CCLE
TDQKTVPTP
DEG_COP1_1
0.25
p.P993Q
NB13
autonomic_ganglia
COSMIC
TDQKTVPTP
DEG_COP1_1
0.7035
p.A984S
HEC-1
endometrium
COSMIC
TDQKTVPTP
DEG_COP1_1
0.2222
p.V1003I
SNG-M
endometrium
COSMIC
TDQKTVPTP
DEG_COP1_1
0.1389
Drug responses associated with ALMS1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TDQKTVPTP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU4
Alstrom syndrome protein 1
DEG_COP1_1
988:996
TDQKTVPTP
COP1
0.9966
More...