DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
TDSGLVVPSI
Uniprot ID:
Q96F86
Source protein:
Enhancer of mRNA-decapping protein 3
Source gene:
EDC3
Class:
DEG_COP1_1
Location:
273:282
E3 ligase:
COP1
DEGRON score:
0.9059
ASA_SCORE:
50.91
COIL:
0.7614
CONS_SCORE:
0.555
DSS_SCORE:
0.1293
HELIX:
0.0489
FCONS_SCORE:
1.3052
RIG_SCORE:
0.8111
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y284H
TCGA-4R-AA8I
LIHC
TCGA
TDSGLVVPSI
DEG_COP1_1
0.2778
p.Y284H
DO49657
LIHC
ICGC
TDSGLVVPSI
DEG_COP1_1
0.2778
p.P264T
DO229031
LICA
ICGC
TDSGLVVPSI
DEG_COP1_1
0.0833
p.F271L
DO229268
THCA
ICGC
TDSGLVVPSI
DEG_COP1_1
0.2778
p.V267M
SIDM01237
Hepatocellular Carcinoma
GDSC
TDSGLVVPSI
DEG_COP1_1
0.1667
p.V267M
SIDM00594
Acute Myeloid Leukemia
GDSC
TDSGLVVPSI
DEG_COP1_1
0.1667
p.V267M
SIDM01206
Neuroblastoma
GDSC
TDSGLVVPSI
DEG_COP1_1
0.1667
p.V267M
SIDM00049
Colorectal Carcinoma
GDSC
TDSGLVVPSI
DEG_COP1_1
0.1667
Drug responses associated with EDC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TDSGLVVPSI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96F86
Enhancer of mRNA-decapping protein 3
DEG_COP1_1
273:282
TDSGLVVPSI
COP1
0.9059
More...