DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TEDETPKK
Uniprot ID:
Q15021
Source protein:
Condensin complex subunit 1
Source gene:
NCAPD2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
1380:1387
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9938
ASA_SCORE:
113.5375
COIL:
0.8379
CONS_SCORE:
0.3226
DSS_SCORE:
0.6731
HELIX:
0.1323
FCONS_SCORE:
1.0053
RIG_SCORE:
0.6819
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1384I
TCGA-91-6829
LUAD
TCGA
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.7078
p.T1384I
DO23564
LUAD
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.7078
p.A1394V
TCGA-L3-A4E7
LUSC
TCGA
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.1389
p.A1394V
DO45458
LUSC
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.1389
p.R1397C
DO230336
COCA
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.0556
p.E1383K
DO222864
COCA
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.591
p.E1383K
DO233823
GACA
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.591
p.E1383K
SIDM01187
Breast Carcinoma
GDSC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.591
p.E1383K
SIDM00667
Other Sarcomas
GDSC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.591
p.K1386R
DO23428
LINC
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.6126
p.P1385S
DO220899
MELA
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.6752
p.P1390S
DO220908
MELA
ICGC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.25
p.S1370C
SIDM00852
Glioma
GDSC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5
p.S1370C
ACH-000389
Brain Cancer
CCLE
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5
p.S1370C
H4
central_nervous_system
COSMIC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5
p.S1395L
SIDM00999
Bladder Carcinoma
GDSC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5556
p.S1395L
ACH-000973
Bladder Cancer
CCLE
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5556
p.S1395L
639-V
urinary_tract
COSMIC
TEDETPKK
DEG_SCF_SKP2-CKS1_1
0.5556
Drug responses associated with NCAPD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TEDETPKK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q15021
Condensin complex subunit 1
DEG_SCF_SKP2-CKS1_1
1380:1387
TEDETPKK
SKP2,CSK1
0.9938
More...