DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TESPRVPSI
Uniprot ID:
Q02388
Source protein:
Collagen alpha-1
Source gene:
COL7A1
Class:
DEG_COP1_1
Location:
952:960
E3 ligase:
COP1
DEGRON score:
0.9684
ASA_SCORE:
71.3889
COIL:
0.7199
CONS_SCORE:
0.5213
DSS_SCORE:
0.4164
HELIX:
0.0114
FCONS_SCORE:
1.0172
RIG_SCORE:
0.7445
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D970N
TCGA-FI-A2D5
UCEC
TCGA
TESPRVPSI
DEG_COP1_1
0.0556
p.D970N
DO41331
UCEC
ICGC
TESPRVPSI
DEG_COP1_1
0.0556
p.R963C
TCGA-GV-A6ZA
BLCA
TCGA
TESPRVPSI
DEG_COP1_1
0.25
p.R963C
DO49776
BLCA
ICGC
TESPRVPSI
DEG_COP1_1
0.25
p.R963C
SIDM00217
Colorectal Carcinoma
GDSC
TESPRVPSI
DEG_COP1_1
0.25
p.R963C
ACH-000999
Colon/Colorectal Cancer
CCLE
TESPRVPSI
DEG_COP1_1
0.25
p.R963C
SNU-1040
large_intestine
COSMIC
TESPRVPSI
DEG_COP1_1
0.25
p.S959R
TCGA-LN-A5U7
ESCA
TCGA
TESPRVPSI
DEG_COP1_1
0.7427
p.R951H
DO222501
COCA
ICGC
TESPRVPSI
DEG_COP1_1
0.3056
p.R951C
DO234393
ESAD
ICGC
TESPRVPSI
DEG_COP1_1
0.3056
p.R951C
DO233261
GACA
ICGC
TESPRVPSI
DEG_COP1_1
0.3056
p.T967N
DO228974
LICA
ICGC
TESPRVPSI
DEG_COP1_1
0.1389
p.P944T
DO229018
LICA
ICGC
TESPRVPSI
DEG_COP1_1
0.1111
p.R951S
DO229029
LICA
ICGC
TESPRVPSI
DEG_COP1_1
0.3056
p.R963S
DO229028
LICA
ICGC
TESPRVPSI
DEG_COP1_1
0.25
p.E953K
DO229275
THCA
ICGC
TESPRVPSI
DEG_COP1_1
0.591
p.A946T
SIDM00759
Non-Small Cell Lung Carcinoma
GDSC
TESPRVPSI
DEG_COP1_1
0.1667
p.A946T
ACH-000587
Lung Cancer
CCLE
TESPRVPSI
DEG_COP1_1
0.1667
p.A946T
NCI-H1975
lung
COSMIC
TESPRVPSI
DEG_COP1_1
0.1667
p.P958S
SIDM00781
Colorectal Carcinoma
GDSC
TESPRVPSI
DEG_COP1_1
0.6752
p.P958S
SIDM00780
Colorectal Carcinoma
GDSC
TESPRVPSI
DEG_COP1_1
0.6752
p.P958S
ACH-000967
Colon/Colorectal Cancer
CCLE
TESPRVPSI
DEG_COP1_1
0.6752
p.P958S
ACH-001199
Colon/Colorectal Cancer
CCLE
TESPRVPSI
DEG_COP1_1
0.6752
p.P958S
SNU-C2B
large_intestine
COSMIC
TESPRVPSI
DEG_COP1_1
0.6752
Drug responses associated with COL7A1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TESPRVPSI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q02388
Collagen alpha-1
DEG_COP1_1
952:960
TESPRVPSI
COP1
0.9684
More...