DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TEVNHVPSGP
Uniprot ID:
Q96T58
Source protein:
Msx2-interacting protein
Source gene:
SPEN
Class:
DEG_COP1_1
Location:
2996:3005
E3 ligase:
COP1
DEGRON score:
0.9877
ASA_SCORE:
99.14
COIL:
0.9597
CONS_SCORE:
0.3649
DSS_SCORE:
0.6315
HELIX:
0.0188
FCONS_SCORE:
0.9748
RIG_SCORE:
0.6138
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E2997K
TCGA-05-4395
LUAD
TCGA
TEVNHVPSGP
DEG_COP1_1
0.7022
p.E2997K
DO25444
LUAD
ICGC
TEVNHVPSGP
DEG_COP1_1
0.7022
p.V3013D
TCGA-CD-A4MG
STAD
TCGA
TEVNHVPSGP
DEG_COP1_1
0.1111
p.V3013D
DO48009
STAD
ICGC
TEVNHVPSGP
DEG_COP1_1
0.1111
p.P3002H
TCGA-EE-A2M8
SKCM
TCGA
TEVNHVPSGP
DEG_COP1_1
0.7694
p.P3002H
DO38075
SKCM
ICGC
TEVNHVPSGP
DEG_COP1_1
0.7694
p.R3011Q
TCGA-EO-A3AV
UCEC
TCGA
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
DO52412
UCEC
ICGC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
SIDM00425
Ovarian Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
SIDM00118
Colorectal Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
SIDM01695
Acute Myeloid Leukemia
GDSC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
SIDM01445
Gastric Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
SIDM01762
Esophageal Squamous Cell Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
HCC2998
large_intestine
COSMIC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011Q
OVTOKO
ovary
COSMIC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.S3003L
TCGA-FD-A6TB
BLCA
TCGA
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
TCGA-HU-A4H5
STAD
TCGA
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
DO51879
BLCA
ICGC
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
DO232761
PBCA
ICGC
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
DO47727
STAD
ICGC
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
SIDM00358
Gastric Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
ACH-000144
Gastric Cancer
CCLE
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
ACH-001409
Bladder Cancer
CCLE
TEVNHVPSGP
DEG_COP1_1
0.7667
p.S3003L
RERF-GC-1B
stomach
COSMIC
TEVNHVPSGP
DEG_COP1_1
0.7667
p.P3008S
TCGA-GF-A6C9
SKCM
TCGA
TEVNHVPSGP
DEG_COP1_1
0.25
p.P3008S
DO51254
SKCM
ICGC
TEVNHVPSGP
DEG_COP1_1
0.25
p.I3007L
TCGA-GU-A767
BLCA
TCGA
TEVNHVPSGP
DEG_COP1_1
0.2778
p.I3007L
DO51892
BLCA
ICGC
TEVNHVPSGP
DEG_COP1_1
0.2778
p.R3011L
TCGA-KQ-A41N
BLCA
TCGA
TEVNHVPSGP
DEG_COP1_1
0.1667
p.R3011L
DO223588
BLCA
ICGC
TEVNHVPSGP
DEG_COP1_1
0.1667
p.A3009G
TCGA-QT-A5XO
PCPG
TCGA
TEVNHVPSGP
DEG_COP1_1
0.2222
p.P3008Q
SIDM00568
Gastric Carcinoma
GDSC
TEVNHVPSGP
DEG_COP1_1
0.25
p.P3008Q
ACH-000247
Gastric Cancer
CCLE
TEVNHVPSGP
DEG_COP1_1
0.25
p.P3008Q
OCUM-1
stomach
COSMIC
TEVNHVPSGP
DEG_COP1_1
0.25
Drug responses associated with SPEN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TEVNHVPSGP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96T58
Msx2-interacting protein
DEG_COP1_1
2996:3005
TEVNHVPSGP
COP1
0.9877
More...