DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TFSSCVPDP
Uniprot ID:
Q14766
Source protein:
Latent-transforming growth factor beta-binding protein 1
Source gene:
LTBP1
Class:
DEG_COP1_1
Location:
661:669
E3 ligase:
COP1
DEGRON score:
0.5437
ASA_SCORE:
78.6778
COIL:
0.7359
CONS_SCORE:
0.8385
DSS_SCORE:
0.2946
HELIX:
0.0094
FCONS_SCORE:
0.9212
RIG_SCORE:
0.7454
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.F656L
TCGA-55-8208
LUAD
TCGA
TFSSCVPDP
DEG_COP1_1
0.1944
p.P667S
TCGA-AJ-A3EL
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.6752
p.P667S
TCGA-AP-A1DV
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.6752
p.P667S
TCGA-AZ-4315
COAD
TCGA
TFSSCVPDP
DEG_COP1_1
0.6752
p.P667S
TCGA-B5-A0JY
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.6752
p.P667S
TCGA-EI-6917
READ
TCGA
TFSSCVPDP
DEG_COP1_1
0.6752
p.I672V
TCGA-AJ-A3EL
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.25
p.T651A
TCGA-AP-A0LM
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.0556
p.S664G
TCGA-AP-A1DK
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.5882
p.T651I
TCGA-BT-A2LA
BLCA
TCGA
TFSSCVPDP
DEG_COP1_1
0.0556
p.G657E
TCGA-DF-A2KU
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.2222
p.S664I
TCGA-DU-6392
LGG
TCGA
TFSSCVPDP
DEG_COP1_1
0.623
p.G655E
TCGA-EE-A3AG
SKCM
TCGA
TFSSCVPDP
DEG_COP1_1
0.1667
p.G655E
TCGA-FS-A1ZA
SKCM
TCGA
TFSSCVPDP
DEG_COP1_1
0.1667
p.E674K
TCGA-EO-A22R
UCEC
TCGA
TFSSCVPDP
DEG_COP1_1
0.1944
p.E674K
SIDM00756
Non-Small Cell Lung Carcinoma
GDSC
TFSSCVPDP
DEG_COP1_1
0.1944
p.E674K
NCI-H2009
lung
COSMIC
TFSSCVPDP
DEG_COP1_1
0.1944
p.R670G
DO2545
BRCA
ICGC
TFSSCVPDP
DEG_COP1_1
0.3056
p.G662V
DO50090
COAD
ICGC
TFSSCVPDP
DEG_COP1_1
0.7532
p.R664L
DO234393
ESAD
ICGC
TFSSCVPDP
DEG_COP1_1
0.8428
p.R664P
DO14862
HNSC
ICGC
TFSSCVPDP
DEG_COP1_1
0.7512
p.S661I
DO229027
LICA
ICGC
TFSSCVPDP
DEG_COP1_1
0.7341
p.C677F
DO229031
LICA
ICGC
TFSSCVPDP
DEG_COP1_1
0.1111
p.R664H
DO49657
LIHC
ICGC
TFSSCVPDP
DEG_COP1_1
0.8244
p.Q667H
DO23580
LUAD
ICGC
TFSSCVPDP
DEG_COP1_1
0.7582
p.G652W
DO231049
LUSC
ICGC
TFSSCVPDP
DEG_COP1_1
0.0833
p.S661N
DO37412
SKCM
ICGC
TFSSCVPDP
DEG_COP1_1
0.7069
p.A652V
DO37499
SKCM
ICGC
TFSSCVPDP
DEG_COP1_1
0.0833
p.S661G
DO47831
STAD
ICGC
TFSSCVPDP
DEG_COP1_1
0.6993
p.G655R
SIDM00221
Melanoma
GDSC
TFSSCVPDP
DEG_COP1_1
0.1667
p.G655R
ACH-000339
Lung Cancer
CCLE
TFSSCVPDP
DEG_COP1_1
0.1667
p.P658S
SIDM01611
Endometrial Carcinoma
GDSC
TFSSCVPDP
DEG_COP1_1
0.25
p.A670S
ACH-001627
Prostate Cancer
CCLE
TFSSCVPDP
DEG_COP1_1
0.3056
p.C658F
EBC-1
lung
COSMIC
TFSSCVPDP
DEG_COP1_1
0.25
p.R654Q
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
TFSSCVPDP
DEG_COP1_1
0.1389
p.E656Q
MDA-MB-330
breast
COSMIC
TFSSCVPDP
DEG_COP1_1
0.1944
p.N678H
JHU-029
upper_aerodigestive_tract
COSMIC
TFSSCVPDP
DEG_COP1_1
0.0833
Drug responses associated with LTBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TFSSCVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14766
Latent-transforming growth factor beta-binding protein 1
DEG_COP1_1
661:669
TFSSCVPDP
COP1
0.5437
More...