DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TGGTEVMVPSF
Uniprot ID:
P49792
Source protein:
E3 SUMO-protein ligase RanBP2
Source gene:
RANBP2
Class:
DEG_COP1_1
Location:
2780:2790
E3 ligase:
COP1
DEGRON score:
0.9986
ASA_SCORE:
73.0818
COIL:
0.7539
CONS_SCORE:
0.3394
DSS_SCORE:
0.5007
HELIX:
0.0645
FCONS_SCORE:
1.0613
RIG_SCORE:
0.7611
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S2789Y
TCGA-A5-A2K5
UCEC
TCGA
TGGTEVMVPSF
DEG_COP1_1
0.712
p.S2789Y
DO41379
UCEC
ICGC
TGGTEVMVPSF
DEG_COP1_1
0.712
p.F2790L
TCGA-A8-A09A
BRCA
TCGA
TGGTEVMVPSF
DEG_COP1_1
0.587
p.F2790L
DO2955
BRCA
ICGC
TGGTEVMVPSF
DEG_COP1_1
0.587
p.F2790L
SIDM01242
Melanoma
GDSC
TGGTEVMVPSF
DEG_COP1_1
0.587
p.F2790L
SIDM01781
Gastric Carcinoma
GDSC
TGGTEVMVPSF
DEG_COP1_1
0.587
p.F2790L
SIDM01767
Squamous Cell Lung Carcinoma
GDSC
TGGTEVMVPSF
DEG_COP1_1
0.587
p.S2798Y
TCGA-AX-A05Z
UCEC
TCGA
TGGTEVMVPSF
DEG_COP1_1
0.5556
p.S2798Y
DO40884
UCEC
ICGC
TGGTEVMVPSF
DEG_COP1_1
0.5556
p.V2787G
TCGA-GS-A9TV
DLBC
TCGA
TGGTEVMVPSF
DEG_COP1_1
0.7532
p.V2787G
DO219914
DLBC
ICGC
TGGTEVMVPSF
DEG_COP1_1
0.7532
p.V2787I
DO233823
GACA
ICGC
TGGTEVMVPSF
DEG_COP1_1
0.7076
p.V2787I
SIDM00217
Colorectal Carcinoma
GDSC
TGGTEVMVPSF
DEG_COP1_1
0.7076
p.V2787I
ACH-000999
Colon/Colorectal Cancer
CCLE
TGGTEVMVPSF
DEG_COP1_1
0.7076
p.V2787I
SNU-1040
large_intestine
COSMIC
TGGTEVMVPSF
DEG_COP1_1
0.7076
Drug responses associated with RANBP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TGGTEVMVPSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49792
E3 SUMO-protein ligase RanBP2
DEG_COP1_1
2780:2790
TGGTEVMVPSF
COP1
0.9986
More...