DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TGLSPPVPSF
Uniprot ID:
O43164
Source protein:
E3 ubiquitin-protein ligase Praja-2
Source gene:
PJA2
Class:
DEG_COP1_1
Location:
213:222
E3 ligase:
COP1
DEGRON score:
0.9975
ASA_SCORE:
67.42
COIL:
0.8984
CONS_SCORE:
0.3027
DSS_SCORE:
0.442
HELIX:
0.0511
FCONS_SCORE:
0.8718
RIG_SCORE:
0.7055
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R227K
TCGA-AC-A2B8
BRCA
TCGA
TGLSPPVPSF
DEG_COP1_1
0.1944
p.R227K
DO5884
BRCA
ICGC
TGLSPPVPSF
DEG_COP1_1
0.1944
p.D228N
TCGA-BH-A0HA
BRCA
TCGA
TGLSPPVPSF
DEG_COP1_1
0.1667
p.D228N
DO1658
BRCA
ICGC
TGLSPPVPSF
DEG_COP1_1
0.1667
p.A211V
DO234286
ESAD
ICGC
TGLSPPVPSF
DEG_COP1_1
0.2778
p.P220L
DO228947
LICA
ICGC
TGLSPPVPSF
DEG_COP1_1
0.7582
p.P220L
SIDM01259
B-Lymphoblastic Leukemia
GDSC
TGLSPPVPSF
DEG_COP1_1
0.7582
p.P220L
SIDM00324
Neuroblastoma
GDSC
TGLSPPVPSF
DEG_COP1_1
0.7582
p.P218Q
DO229015
LICA
ICGC
TGLSPPVPSF
DEG_COP1_1
0.5924
p.P218A
SIDM00690
Head and Neck Carcinoma
GDSC
TGLSPPVPSF
DEG_COP1_1
0.6392
p.P218A
ACH-002251
Head and Neck Cancer
CCLE
TGLSPPVPSF
DEG_COP1_1
0.6392
p.P218A
JHU-029
upper_aerodigestive_tract
COSMIC
TGLSPPVPSF
DEG_COP1_1
0.6392
Drug responses associated with PJA2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TGLSPPVPSF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43164
E3 ubiquitin-protein ligase Praja-2
DEG_COP1_1
213:222
TGLSPPVPSF
COP1
0.9975
More...