DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TGLTYRVPSL
Uniprot ID:
Q8WWR8
Source protein:
Sialidase-4
Source gene:
NEU4
Class:
DEG_COP1_1
Location:
18:27
E3 ligase:
COP1
DEGRON score:
0.879
ASA_SCORE:
23.31
COIL:
0.2468
CONS_SCORE:
0.6768
DSS_SCORE:
0.3883
HELIX:
0.0047
FCONS_SCORE:
1.23
RIG_SCORE:
0.7772
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R18C
TCGA-E7-A7XN
BLCA
TCGA
TGLTYRVPSL
DEG_COP1_1
0.8301
p.R18C
TCGA-EJ-7782
PRAD
TCGA
TGLTYRVPSL
DEG_COP1_1
0.8301
p.R22Q
TCGA-19-5959
GBM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.7329
p.R21Q
DO11651
GBM
ICGC
TGLTYRVPSL
DEG_COP1_1
0.7329
p.P20T
TCGA-CV-7238
HNSC
TCGA
TGLTYRVPSL
DEG_COP1_1
0.7031
p.E27K
TCGA-D3-A5GN
SKCM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.7022
p.E27K
DO47317
SKCM
ICGC
TGLTYRVPSL
DEG_COP1_1
0.7022
p.L25F
TCGA-EE-A2GN
SKCM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.6981
p.R28Q
TCGA-ER-A198
SKCM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R28Q
DO47563
SKCM
ICGC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R28W
TCGA-F5-6814
READ
TCGA
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R28L
TCGA-FS-A1Z0
SKCM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17C
DO51878
BLCA
ICGC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17C
DO229389
BTCA
ICGC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17C
DO36256
PRAD
ICGC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17M
DO37410
SKCM
ICGC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17M
NCI-H2342
lung
COSMIC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17K
ACH-000638
Lung Cancer
CCLE
TGLTYRVPSL
DEG_COP1_1
0.3056
p.R17K
NCI-H441
lung
COSMIC
TGLTYRVPSL
DEG_COP1_1
0.3056
p.E29K
TCGA-EE-A2MM
SKCM
TCGA
TGLTYRVPSL
DEG_COP1_1
0.2778
p.E16K
DO222678
MELA
ICGC
TGLTYRVPSL
DEG_COP1_1
0.2778
p.E16K
DO37770
SKCM
ICGC
TGLTYRVPSL
DEG_COP1_1
0.2778
p.E16D
DO50707
ORCA
ICGC
TGLTYRVPSL
DEG_COP1_1
0.2778
p.R29S
DO46657
PAAD
ICGC
TGLTYRVPSL
DEG_COP1_1
0.2778
p.P29L
ACH-000995
Leukemia
CCLE
TGLTYRVPSL
DEG_COP1_1
0.2778
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Drug responses associated with NEU4 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TGLTYRVPSL
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WWR8
Sialidase-4
DEG_COP1_1
18:27
TGLTYRVPSL
COP1
0.879
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