DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TISEGPVPSL
Uniprot ID:
O43426
Source protein:
Synaptojanin-1
Source gene:
SYNJ1
Class:
DEG_COP1_1
Location:
1055:1064
E3 ligase:
COP1
DEGRON score:
0.979
ASA_SCORE:
87.99
COIL:
0.9551
CONS_SCORE:
0.3163
DSS_SCORE:
0.7572
HELIX:
0.018
FCONS_SCORE:
0.979
RIG_SCORE:
0.5811
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1062D
TCGA-AX-A3FT
UCEC
TCGA
TISEGPVPSL
DEG_COP1_1
0.6758
p.S1058I
TCGA-DU-6392
LGG
TCGA
TISEGPVPSL
DEG_COP1_1
0.7341
p.L1065F
TCGA-EE-A3AG
SKCM
TCGA
TISEGPVPSL
DEG_COP1_1
0.3056
p.L1065F
TCGA-GU-A767
BLCA
TCGA
TISEGPVPSL
DEG_COP1_1
0.3056
p.D1049H
TCGA-GV-A6ZA
BLCA
TCGA
TISEGPVPSL
DEG_COP1_1
0.6111
p.S1073L
TCGA-ZS-A9CF
LIHC
TCGA
TISEGPVPSL
DEG_COP1_1
0.0833
p.R1047Q
DO8842
COAD
ICGC
TISEGPVPSL
DEG_COP1_1
0.1111
p.G1059C
DO14250
HNSC
ICGC
TISEGPVPSL
DEG_COP1_1
0.6489
p.P1050S
DO229459
SKCA
ICGC
TISEGPVPSL
DEG_COP1_1
0.1944
p.R1070G
DO37567
SKCM
ICGC
TISEGPVPSL
DEG_COP1_1
0.1667
p.P1065S
DO47309
SKCM
ICGC
TISEGPVPSL
DEG_COP1_1
0.3056
p.I1056M
DO43971
UCEC
ICGC
TISEGPVPSL
DEG_COP1_1
0.6507
p.S1058G
SIDM00216
Colorectal Carcinoma
GDSC
TISEGPVPSL
DEG_COP1_1
0.6993
p.S1058G
ACH-000989
Colon/Colorectal Cancer
CCLE
TISEGPVPSL
DEG_COP1_1
0.6993
p.S1058G
SNU-175
large_intestine
COSMIC
TISEGPVPSL
DEG_COP1_1
0.6993
p.A1046V
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
TISEGPVPSL
DEG_COP1_1
0.0833
p.A1046V
ACH-000980
Lung Cancer
CCLE
TISEGPVPSL
DEG_COP1_1
0.0833
p.A1046V
NCI-H1155
lung
COSMIC
TISEGPVPSL
DEG_COP1_1
0.0833
Drug responses associated with SYNJ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TISEGPVPSL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43426
Synaptojanin-1
DEG_COP1_1
1055:1064
TISEGPVPSL
COP1
0.979
More...