DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TKTTAPVPEP
Uniprot ID:
Q86VM9
Source protein:
Zinc finger CCCH domain-containing protein 18
Source gene:
ZC3H18
Class:
DEG_COP1_1
Location:
650:659
E3 ligase:
COP1
DEGRON score:
0.9783
ASA_SCORE:
108.34
COIL:
0.9698
CONS_SCORE:
0.5315
DSS_SCORE:
0.8674
HELIX:
0.0139
FCONS_SCORE:
1.0162
RIG_SCORE:
0.5566
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P655S
TCGA-DU-6407
LGG
TCGA
TKTTAPVPEP
DEG_COP1_1
0.5641
p.P655S
TCGA-EE-A2MD
SKCM
TCGA
TKTTAPVPEP
DEG_COP1_1
0.5641
p.P655S
DO22295
LGG
ICGC
TKTTAPVPEP
DEG_COP1_1
0.5641
p.P655S
DO37851
SKCM
ICGC
TKTTAPVPEP
DEG_COP1_1
0.5641
p.R666L
TCGA-EE-A2MS
SKCM
TCGA
TKTTAPVPEP
DEG_COP1_1
0.1389
p.R666L
TCGA-ER-A19N
SKCM
TCGA
TKTTAPVPEP
DEG_COP1_1
0.1389
p.R666L
DO37567
SKCM
ICGC
TKTTAPVPEP
DEG_COP1_1
0.1389
p.R666L
DO37452
SKCM
ICGC
TKTTAPVPEP
DEG_COP1_1
0.1389
p.D664Y
TCGA-IB-7651
PAAD
TCGA
TKTTAPVPEP
DEG_COP1_1
0.1944
p.D664Y
DO46657
PAAD
ICGC
TKTTAPVPEP
DEG_COP1_1
0.1944
p.E667K
TCGA-V5-AASX
ESCA
TCGA
TKTTAPVPEP
DEG_COP1_1
0.1111
p.P659S
DO228844
LICA
ICGC
TKTTAPVPEP
DEG_COP1_1
0.6752
p.T650I
DO229275
THCA
ICGC
TKTTAPVPEP
DEG_COP1_1
0.7078
p.P651L
SIDM01293
Colorectal Carcinoma
GDSC
TKTTAPVPEP
DEG_COP1_1
0.7582
p.P666L
SIDM01281
Colorectal Carcinoma
GDSC
TKTTAPVPEP
DEG_COP1_1
0.1389
p.P649L
SIDM02021
Esophageal Carcinoma
GDSC
TKTTAPVPEP
DEG_COP1_1
0.3056
p.S660L
SIDM00683
Prostate Carcinoma
GDSC
TKTTAPVPEP
DEG_COP1_1
0.3056
p.P641L
SIDM00316
Glioblastoma
GDSC
TKTTAPVPEP
DEG_COP1_1
0.0833
p.P641L
YH-13
central_nervous_system
COSMIC
TKTTAPVPEP
DEG_COP1_1
0.0833
p.E658K
ACH-001819
Breast Cancer
CCLE
TKTTAPVPEP
DEG_COP1_1
0.7022
p.E658K
MFM-223
breast
COSMIC
TKTTAPVPEP
DEG_COP1_1
0.7022
Drug responses associated with ZC3H18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TKTTAPVPEP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86VM9
Zinc finger CCCH domain-containing protein 18
DEG_COP1_1
650:659
TKTTAPVPEP
COP1
0.9783
More...