DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TLDRKVPSP
Uniprot ID:
Q9ULK2
Source protein:
Ataxin-7-like protein 1
Source gene:
ATXN7L1
Class:
DEG_COP1_1
Location:
31:39
E3 ligase:
COP1
DEGRON score:
0.8087
ASA_SCORE:
65.8444
COIL:
0.7303
CONS_SCORE:
0.2922
DSS_SCORE:
0.5002
HELIX:
0.2247
FCONS_SCORE:
0.8681
RIG_SCORE:
0.7625
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K35E
TCGA-34-5239
LUSC
TCGA
TLDRKVPSP
DEG_COP1_1
0.591
p.K35E
DO27660
LUSC
ICGC
TLDRKVPSP
DEG_COP1_1
0.591
p.K22R
TCGA-AP-A1DK
UCEC
TCGA
TLDRKVPSP
DEG_COP1_1
0.1944
p.K22R
DO42033
UCEC
ICGC
TLDRKVPSP
DEG_COP1_1
0.1944
p.Q24H
TCGA-AX-A0J0
UCEC
TCGA
TLDRKVPSP
DEG_COP1_1
0.1389
p.Q24H
DO41133
UCEC
ICGC
TLDRKVPSP
DEG_COP1_1
0.1389
p.R34S
TCGA-BR-A4QL
STAD
TCGA
TLDRKVPSP
DEG_COP1_1
0.6316
p.R34S
DO38723
STAD
ICGC
TLDRKVPSP
DEG_COP1_1
0.6316
p.P46L
TCGA-D3-A5GU
SKCM
TCGA
TLDRKVPSP
DEG_COP1_1
0.1389
p.P46L
DO47584
SKCM
ICGC
TLDRKVPSP
DEG_COP1_1
0.1389
p.L43V
TCGA-XF-A8HD
BLCA
TCGA
TLDRKVPSP
DEG_COP1_1
0.2222
p.L43V
DO49795
BLCA
ICGC
TLDRKVPSP
DEG_COP1_1
0.2222
p.K22N
DO233777
GACA
ICGC
TLDRKVPSP
DEG_COP1_1
0.1944
p.P46T
DO229034
LICA
ICGC
TLDRKVPSP
DEG_COP1_1
0.1389
p.A41E
DO229034
LICA
ICGC
TLDRKVPSP
DEG_COP1_1
0.2778
p.P39T
DO229036
LICA
ICGC
TLDRKVPSP
DEG_COP1_1
0.7031
p.L32M
DO229008
LICA
ICGC
TLDRKVPSP
DEG_COP1_1
0.5999
p.S48P
DO48701
LIRI
ICGC
TLDRKVPSP
DEG_COP1_1
0.0833
p.V36M
DO46556
OV
ICGC
TLDRKVPSP
DEG_COP1_1
0.7208
p.D33H
SIDM00845
Burkitt's Lymphoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.7688
p.D33H
SIDM00461
Acute Myeloid Leukemia
GDSC
TLDRKVPSP
DEG_COP1_1
0.7688
p.D33H
SIDM00946
T-Lymphoblastic Leukemia
GDSC
TLDRKVPSP
DEG_COP1_1
0.7688
p.D33H
SIDM01519
Head and Neck Carcinoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.7688
p.D33H
ACH-000786
Lymphoma
CCLE
TLDRKVPSP
DEG_COP1_1
0.7688
p.D33H
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
TLDRKVPSP
DEG_COP1_1
0.7688
p.R27T
SIDM00845
Burkitt's Lymphoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
SIDM00461
Acute Myeloid Leukemia
GDSC
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
SIDM00946
T-Lymphoblastic Leukemia
GDSC
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
SIDM01519
Head and Neck Carcinoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
ACH-000786
Lymphoma
CCLE
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
ACH-000992
Head and Neck Cancer
CCLE
TLDRKVPSP
DEG_COP1_1
0.2222
p.R27T
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
TLDRKVPSP
DEG_COP1_1
0.2222
p.F42L
SIDM01118
Small Cell Lung Carcinoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.25
p.F42L
ACH-002175
Lung Cancer
CCLE
TLDRKVPSP
DEG_COP1_1
0.25
p.F42L
NCI-H740
lung
COSMIC
TLDRKVPSP
DEG_COP1_1
0.25
p.P39A
SIDM00954
Breast Carcinoma
GDSC
TLDRKVPSP
DEG_COP1_1
0.6392
p.P39A
ACH-001820
Breast Cancer
CCLE
TLDRKVPSP
DEG_COP1_1
0.6392
p.P39A
COLO-824
breast
COSMIC
TLDRKVPSP
DEG_COP1_1
0.6392
p.Y40C
23132-87
stomach
COSMIC
TLDRKVPSP
DEG_COP1_1
0.3056
p.H43R
KYSE-70
oesophagus
COSMIC
TLDRKVPSP
DEG_COP1_1
0.2222
Drug responses associated with ATXN7L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TLDRKVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9ULK2
Ataxin-7-like protein 1
DEG_COP1_1
31:39
TLDRKVPSP
COP1
0.8087
More...