DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TLDSRPSVPSP
Uniprot ID:
O75064
Source protein:
DENN domain-containing protein 4B
Source gene:
DENND4B
Class:
DEG_COP1_1
Location:
1202:1212
E3 ligase:
COP1
DEGRON score:
0.8041
ASA_SCORE:
78.7091
COIL:
0.8402
CONS_SCORE:
0.3154
DSS_SCORE:
0.5338
HELIX:
0.0184
FCONS_SCORE:
0.8713
RIG_SCORE:
0.6678
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1222N
TCGA-A5-A0G2
UCEC
TCGA
TLDSRPSVPSP
DEG_COP1_1
0.0556
p.D1222N
DO233842
GACA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.0556
p.D1222N
DO41235
UCEC
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.0556
p.Q1201H
TCGA-A5-A0G2
UCEC
TCGA
TLDSRPSVPSP
DEG_COP1_1
0.3056
p.Q1201H
DO41235
UCEC
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.3056
p.A1217V
TCGA-AX-A06F
UCEC
TCGA
TLDSRPSVPSP
DEG_COP1_1
0.1944
p.A1217V
DO41752
UCEC
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.1944
p.S1199G
DO49373
ALL
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.25
p.R1206W
DO233190
GACA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.7523
p.R1206W
DO222557
MELA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.7523
p.P1193L
DO220877
MELA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.0833
p.P1212S
DO222418
MELA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.6752
p.L1198R
DO35442
PACA
ICGC
TLDSRPSVPSP
DEG_COP1_1
0.2222
p.R1206Q
SIDM00651
Non-Small Cell Lung Carcinoma
GDSC
TLDSRPSVPSP
DEG_COP1_1
0.6218
p.R1206Q
ACH-000980
Lung Cancer
CCLE
TLDSRPSVPSP
DEG_COP1_1
0.6218
p.R1206Q
NCI-H1155
lung
COSMIC
TLDSRPSVPSP
DEG_COP1_1
0.6218
p.P1193S
SIDM01029
Esophageal Squamous Cell Carcinoma
GDSC
TLDSRPSVPSP
DEG_COP1_1
0.0833
p.P1193S
ACH-000873
Esophageal Cancer
CCLE
TLDSRPSVPSP
DEG_COP1_1
0.0833
p.P1193S
KYSE-270
oesophagus
COSMIC
TLDSRPSVPSP
DEG_COP1_1
0.0833
Drug responses associated with DENND4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TLDSRPSVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75064
DENN domain-containing protein 4B
DEG_COP1_1
1202:1212
TLDSRPSVPSP
COP1
0.8041
More...