DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TLESTPVPSV
Uniprot ID:
P35658
Source protein:
Nuclear pore complex protein Nup214
Source gene:
NUP214
Class:
DEG_COP1_1
Location:
556:565
E3 ligase:
COP1
DEGRON score:
0.9906
ASA_SCORE:
86.78
COIL:
0.9414
CONS_SCORE:
0.3347
DSS_SCORE:
0.4296
HELIX:
0.0183
FCONS_SCORE:
1.0657
RIG_SCORE:
0.6715
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G549V
TCGA-BQ-5880
KIRP
TCGA
TLESTPVPSV
DEG_COP1_1
0.1389
p.G549V
DO20754
KIRP
ICGC
TLESTPVPSV
DEG_COP1_1
0.1389
p.P563S
TCGA-DK-AA76
BLCA
TCGA
TLESTPVPSV
DEG_COP1_1
0.6752
p.P563S
DO219013
BLCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.6752
p.M572T
TCGA-VQ-A91E
STAD
TCGA
TLESTPVPSV
DEG_COP1_1
0.1389
p.M572T
DO51784
STAD
ICGC
TLESTPVPSV
DEG_COP1_1
0.1389
p.P568A
DO48446
BLCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.25
p.P574S
DO229010
COCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.P574S
DO229013
COCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.P574S
DO229016
COCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.P574S
DO229005
COCA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.P574S
DO228941
LICA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.P574S
DO229028
LICA
ICGC
TLESTPVPSV
DEG_COP1_1
0.0833
p.E558K
SIDM01119
Other Solid Cancers
GDSC
TLESTPVPSV
DEG_COP1_1
0.591
p.E558K
ACH-000775
Lung Cancer
CCLE
TLESTPVPSV
DEG_COP1_1
0.591
p.E558K
NCI-H727
lung
COSMIC
TLESTPVPSV
DEG_COP1_1
0.591
p.V562M
SIDM00660
Colorectal Carcinoma
GDSC
TLESTPVPSV
DEG_COP1_1
0.7208
p.V562M
ACH-000985
Colon/Colorectal Cancer
CCLE
TLESTPVPSV
DEG_COP1_1
0.7208
p.V562M
LS-411N
large_intestine
COSMIC
TLESTPVPSV
DEG_COP1_1
0.7208
p.I570V
SIDM01134
Small Cell Lung Carcinoma
GDSC
TLESTPVPSV
DEG_COP1_1
0.1944
p.I570V
ACH-000292
Lung Cancer
CCLE
TLESTPVPSV
DEG_COP1_1
0.1944
p.I570V
NCI-H841
lung
COSMIC
TLESTPVPSV
DEG_COP1_1
0.1944
p.S572G
CW-2
large_intestine
COSMIC
TLESTPVPSV
DEG_COP1_1
0.1389
p.Y574F
NCI-H650
lung
COSMIC
TLESTPVPSV
DEG_COP1_1
0.0833
p.V552I
Hs940-T
skin
COSMIC
TLESTPVPSV
DEG_COP1_1
0.2222
p.S561L
RCC-ER
kidney
COSMIC
TLESTPVPSV
DEG_COP1_1
0.7667
Drug responses associated with NUP214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TLESTPVPSV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_COP1_1
556:565
TLESTPVPSV
COP1
0.9906
More...