DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TLTTLPLVPTA
Uniprot ID:
E9PAV3
Source protein:
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
Source gene:
NACA
Class:
DEG_COP1_1
Location:
694:704
E3 ligase:
COP1
DEGRON score:
0.9279
ASA_SCORE:
90.0727
COIL:
0.9501
CONS_SCORE:
0.4422
DSS_SCORE:
0.4478
HELIX:
0.0145
FCONS_SCORE:
1.5529
RIG_SCORE:
0.7604
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G699A
TCGA-CF-A47X
BLCA
TCGA
TLTTLPLVPTA
DEG_COP1_1
0.754
p.P693L
TCGA-VQ-A8P2
STAD
TCGA
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.P693L
SIDM00951
T-Lymphoblastic Leukemia
GDSC
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.P693L
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.S697F
TCGA-WE-A8K5
SKCM
TCGA
TLTTLPLVPTA
DEG_COP1_1
0.7982
p.P712A
DO2401
BRCA
ICGC
TLTTLPLVPTA
DEG_COP1_1
0.1111
p.P714L
DO37543
SKCM
ICGC
TLTTLPLVPTA
DEG_COP1_1
0.0556
p.P685L
DO37567
SKCM
ICGC
TLTTLPLVPTA
DEG_COP1_1
0.0833
p.P712S
DO51246
SKCM
ICGC
TLTTLPLVPTA
DEG_COP1_1
0.1111
p.G698R
SIDM01016
T-Lymphoblastic Leukemia
GDSC
TLTTLPLVPTA
DEG_COP1_1
0.7568
p.G698R
Jurkat
haematopoietic_and_lymphoid_tissue
COSMIC
TLTTLPLVPTA
DEG_COP1_1
0.7568
p.V705I
SIDM00783
Colorectal Carcinoma
GDSC
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.V705I
HCT-116
large_intestine
COSMIC
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.K691E
ACH-000891
Lung Cancer
CCLE
TLTTLPLVPTA
DEG_COP1_1
0.3611
p.S713P
ACH-000989
Colon/Colorectal Cancer
CCLE
TLTTLPLVPTA
DEG_COP1_1
0.0833
p.S713P
SNU-175
large_intestine
COSMIC
TLTTLPLVPTA
DEG_COP1_1
0.0833
p.L695R
ACH-000996
Endometrial/Uterine Cancer
CCLE
TLTTLPLVPTA
DEG_COP1_1
0.7316
p.S705L
ACH-002181
Ovarian Cancer
CCLE
TLTTLPLVPTA
DEG_COP1_1
0.3056
p.S705L
OVCA420
ovary
COSMIC
TLTTLPLVPTA
DEG_COP1_1
0.3056
Drug responses associated with NACA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TLTTLPLVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
E9PAV3
Nascent polypeptide-associated complex subunit alpha, muscle-specific form
DEG_COP1_1
694:704
TLTTLPLVPTA
COP1
0.9279
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