DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TLVDKSVPEP
Uniprot ID:
Q16586
Source protein:
Alpha-sarcoglycan
Source gene:
SGCA
Class:
DEG_COP1_1
Location:
248:257
E3 ligase:
COP1
DEGRON score:
0.954
ASA_SCORE:
80.86
COIL:
0.7189
CONS_SCORE:
0.4542
DSS_SCORE:
0.3589
HELIX:
0.0175
FCONS_SCORE:
0.9917
RIG_SCORE:
0.779
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P262S
TCGA-CK-4951
COAD
TCGA
TLVDKSVPEP
DEG_COP1_1
0.1944
p.P262S
DO10582
COAD
ICGC
TLVDKSVPEP
DEG_COP1_1
0.1944
p.G265C
TCGA-D1-A16N
UCEC
TCGA
TLVDKSVPEP
DEG_COP1_1
0.1111
p.G265C
DO43771
UCEC
ICGC
TLVDKSVPEP
DEG_COP1_1
0.1111
p.G267W
TCGA-G7-6797
KIRP
TCGA
TLVDKSVPEP
DEG_COP1_1
0.0556
p.G267W
DO20917
KIRP
ICGC
TLVDKSVPEP
DEG_COP1_1
0.0556
p.R246Q
DO222765
COCA
ICGC
TLVDKSVPEP
DEG_COP1_1
0.2778
p.R246Q
DO15623
HNSC
ICGC
TLVDKSVPEP
DEG_COP1_1
0.2778
p.R246Q
DO229054
LICA
ICGC
TLVDKSVPEP
DEG_COP1_1
0.2778
p.V250L
DO229015
LICA
ICGC
TLVDKSVPEP
DEG_COP1_1
0.5654
p.R250L
DO23637
LUAD
ICGC
TLVDKSVPEP
DEG_COP1_1
0.8428
p.R246W
DO46657
PAAD
ICGC
TLVDKSVPEP
DEG_COP1_1
0.2778
p.A254T
DO42336
UCEC
ICGC
TLVDKSVPEP
DEG_COP1_1
0.7139
p.L247M
DO42608
UCEC
ICGC
TLVDKSVPEP
DEG_COP1_1
0.3056
p.G244C
DO41331
UCEC
ICGC
TLVDKSVPEP
DEG_COP1_1
0.2222
p.V247M
SIDM01007
T-Lymphoblastic Leukemia
GDSC
TLVDKSVPEP
DEG_COP1_1
0.3056
p.V247M
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
TLVDKSVPEP
DEG_COP1_1
0.3056
Drug responses associated with SGCA mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TLVDKSVPEP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16586
Alpha-sarcoglycan
DEG_COP1_1
248:257
TLVDKSVPEP
COP1
0.954
More...