DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
TMTDRVPSP
Uniprot ID:
Q6UXF1
Source protein:
Transmembrane protein 108
Source gene:
TMEM108
Class:
DEG_COP1_1
Location:
409:417
E3 ligase:
COP1
DEGRON score:
0.9945
ASA_SCORE:
99.2889
COIL:
0.9376
CONS_SCORE:
0.3906
DSS_SCORE:
0.4622
HELIX:
0.0391
FCONS_SCORE:
0.7876
RIG_SCORE:
0.7749
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T411A
ACH-001610
Brain Cancer
CCLE
TMTDRVPSP
DEG_COP1_1
0.7139
p.M410I
TCGA-IR-A3LH
CESC
TCGA
TMTDRVPSP
DEG_COP1_1
0.6507
p.M410I
DO44381
CESC
ICGC
TMTDRVPSP
DEG_COP1_1
0.6507
p.R413Q
TCGA-IB-7654
PAAD
TCGA
TMTDRVPSP
DEG_COP1_1
0.6218
p.R413Q
DO51695
PAAD
ICGC
TMTDRVPSP
DEG_COP1_1
0.6218
p.D412Y
DO233246
GACA
ICGC
TMTDRVPSP
DEG_COP1_1
0.6214
p.L418F
TCGA-EE-A2M5
SKCM
TCGA
TMTDRVPSP
DEG_COP1_1
0.3056
p.L418F
DO222423
MELA
ICGC
TMTDRVPSP
DEG_COP1_1
0.3056
p.L418F
DO37425
SKCM
ICGC
TMTDRVPSP
DEG_COP1_1
0.3056
p.T404I
TCGA-B5-A3FA
UCEC
TCGA
TMTDRVPSP
DEG_COP1_1
0.1944
p.T404I
DO52402
UCEC
ICGC
TMTDRVPSP
DEG_COP1_1
0.1944
p.T404A
SIDM00228
Thyroid Gland Carcinoma
GDSC
TMTDRVPSP
DEG_COP1_1
0.1944
p.T404A
ACH-000897
Thyroid Cancer
CCLE
TMTDRVPSP
DEG_COP1_1
0.1944
p.G427S
TCGA-A6-2686
COAD
TCGA
TMTDRVPSP
DEG_COP1_1
0.0556
p.G427S
DO7828
COAD
ICGC
TMTDRVPSP
DEG_COP1_1
0.0556
p.G399E
TCGA-EK-A2RJ
CESC
TCGA
TMTDRVPSP
DEG_COP1_1
0.0556
p.G399E
DO49950
CESC
ICGC
TMTDRVPSP
DEG_COP1_1
0.0556
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Drug responses associated with TMEM108 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
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All proteins holding degron of TMTDRVPSP
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UXF1
Transmembrane protein 108
DEG_COP1_1
409:417
TMTDRVPSP
COP1
0.9945
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