DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TMTDRVPSP
Uniprot ID:
Q6UXF1
Source protein:
Transmembrane protein 108
Source gene:
TMEM108
Class:
DEG_COP1_1
Location:
409:417
E3 ligase:
COP1
DEGRON score:
0.9945
ASA_SCORE:
99.2889
COIL:
0.9376
CONS_SCORE:
0.3906
DSS_SCORE:
0.4622
HELIX:
0.0391
FCONS_SCORE:
0.7876
RIG_SCORE:
0.7749
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G427S
TCGA-A6-2686
COAD
TCGA
TMTDRVPSP
DEG_COP1_1
0.0556
p.G427S
DO7828
COAD
ICGC
TMTDRVPSP
DEG_COP1_1
0.0556
p.T404I
TCGA-B5-A3FA
UCEC
TCGA
TMTDRVPSP
DEG_COP1_1
0.1944
p.T404I
DO52402
UCEC
ICGC
TMTDRVPSP
DEG_COP1_1
0.1944
p.L418F
TCGA-EE-A2M5
SKCM
TCGA
TMTDRVPSP
DEG_COP1_1
0.3056
p.L418F
DO222423
MELA
ICGC
TMTDRVPSP
DEG_COP1_1
0.3056
p.L418F
DO37425
SKCM
ICGC
TMTDRVPSP
DEG_COP1_1
0.3056
p.G399E
TCGA-EK-A2RJ
CESC
TCGA
TMTDRVPSP
DEG_COP1_1
0.0556
p.G399E
DO49950
CESC
ICGC
TMTDRVPSP
DEG_COP1_1
0.0556
p.R413Q
TCGA-IB-7654
PAAD
TCGA
TMTDRVPSP
DEG_COP1_1
0.6218
p.R413Q
DO51695
PAAD
ICGC
TMTDRVPSP
DEG_COP1_1
0.6218
p.M410I
TCGA-IR-A3LH
CESC
TCGA
TMTDRVPSP
DEG_COP1_1
0.6507
p.M410I
DO44381
CESC
ICGC
TMTDRVPSP
DEG_COP1_1
0.6507
p.D412Y
DO233246
GACA
ICGC
TMTDRVPSP
DEG_COP1_1
0.6214
p.T404A
SIDM00228
Thyroid Gland Carcinoma
GDSC
TMTDRVPSP
DEG_COP1_1
0.1944
p.T404A
ACH-000897
Thyroid Cancer
CCLE
TMTDRVPSP
DEG_COP1_1
0.1944
p.T411A
ACH-001610
Brain Cancer
CCLE
TMTDRVPSP
DEG_COP1_1
0.7139
Drug responses associated with TMEM108 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TMTDRVPSP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UXF1
Transmembrane protein 108
DEG_COP1_1
409:417
TMTDRVPSP
COP1
0.9945
More...