DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TNSPLVPTF
Uniprot ID:
Q8IX90
Source protein:
Spindle and kinetochore-associated protein 3
Source gene:
SKA3
Class:
DEG_COP1_1
Location:
281:289
E3 ligase:
COP1
DEGRON score:
0.9995
ASA_SCORE:
67.1889
COIL:
0.8394
CONS_SCORE:
0.6916
DSS_SCORE:
0.3765
HELIX:
0.0349
FCONS_SCORE:
1.1517
RIG_SCORE:
0.7738
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T291I
TCGA-06-5416
GBM
TCGA
TNSPLVPTF
DEG_COP1_1
0.7222
p.T291I
DO10880
GBM
ICGC
TNSPLVPTF
DEG_COP1_1
0.7222
p.P297L
TCGA-EE-A3J5
SKCM
TCGA
TNSPLVPTF
DEG_COP1_1
0.1111
p.P297L
DO47331
SKCM
ICGC
TNSPLVPTF
DEG_COP1_1
0.1111
p.Q272K
DO229045
LICA
ICGC
TNSPLVPTF
DEG_COP1_1
0.0833
p.Q272K
DO229006
LICA
ICGC
TNSPLVPTF
DEG_COP1_1
0.0833
p.T281I
DO231832
LINC
ICGC
TNSPLVPTF
DEG_COP1_1
0.8189
p.L294F
SIDM00895
B-Cell Non-Hodgkin's Lymphoma
GDSC
TNSPLVPTF
DEG_COP1_1
0.1944
p.L294F
ACH-002215
Lymphoma
CCLE
TNSPLVPTF
DEG_COP1_1
0.1944
p.L294F
BC-3
haematopoietic_and_lymphoid_tissue
COSMIC
TNSPLVPTF
DEG_COP1_1
0.1944
p.P284H
SIDM01609
Endometrial Carcinoma
GDSC
TNSPLVPTF
DEG_COP1_1
0.6583
p.P284H
ACH-000972
Endometrial/Uterine Cancer
CCLE
TNSPLVPTF
DEG_COP1_1
0.6583
p.L273F
ACH-002017
Eye Cancer
CCLE
TNSPLVPTF
DEG_COP1_1
0.1111
Drug responses associated with SKA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TNSPLVPTF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IX90
Spindle and kinetochore-associated protein 3
DEG_COP1_1
281:289
TNSPLVPTF
COP1
0.9995
More...