DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPATTGVPDA
Uniprot ID:
P35658
Source protein:
Nuclear pore complex protein Nup214
Source gene:
NUP214
Class:
DEG_COP1_1
Location:
1568:1577
E3 ligase:
COP1
DEGRON score:
0.9934
ASA_SCORE:
78.54
COIL:
0.9349
CONS_SCORE:
0.2888
DSS_SCORE:
0.5409
HELIX:
0.0351
FCONS_SCORE:
0.8786
RIG_SCORE:
0.6911
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R1578M
TCGA-AX-A064
UCEC
TCGA
TPATTGVPDA
DEG_COP1_1
0.3056
p.L1560I
TCGA-CR-7388
HNSC
TCGA
TPATTGVPDA
DEG_COP1_1
0.1111
p.R1579M
DO43073
UCEC
ICGC
TPATTGVPDA
DEG_COP1_1
0.2778
p.S1579F
DO43971
UCEC
ICGC
TPATTGVPDA
DEG_COP1_1
0.2778
p.P1581S
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
TPATTGVPDA
DEG_COP1_1
0.2222
Drug responses associated with NUP214 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPATTGVPDA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35658
Nuclear pore complex protein Nup214
DEG_COP1_1
1568:1577
TPATTGVPDA
COP1
0.9934
More...