DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPDAMVQPF
Uniprot ID:
O43251
Source protein:
RNA binding protein fox-1 homolog 2
Source gene:
RBFOX2
Class:
DEG_SIAH_1
Location:
27:35
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.5421
ASA_SCORE:
83.3778
COIL:
0.872
CONS_SCORE:
0.4115
DSS_SCORE:
0.7657
HELIX:
0.1047
FCONS_SCORE:
1.0571
RIG_SCORE:
0.7169
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P33S
TCGA-SQ-A6I6
PCPG
TCGA
TPDAMVQPF
DEG_SIAH_1
0.6752
p.G39E
DO222895
BTCA
ICGC
TPDAMVQPF
DEG_SIAH_1
0.2222
p.A20T
DO8119
COAD
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1389
p.A20T
DO50142
STAD
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1389
p.A20T
DO43186
UCEC
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1389
p.A20T
SW1783
central_nervous_system
COSMIC
TPDAMVQPF
DEG_SIAH_1
0.1389
p.T40S
DO25535
LUAD
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1944
p.L41P
DO220258
SARC
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1667
p.P39S
DO219481
SKCM
ICGC
TPDAMVQPF
DEG_SIAH_1
0.2222
p.D19N
DO40810
UCEC
ICGC
TPDAMVQPF
DEG_SIAH_1
0.1111
p.D38Y
ACH-000436
Myeloma
CCLE
TPDAMVQPF
DEG_SIAH_1
0.25
p.P29S
LNCaP-Clone-FGC
prostate
COSMIC
TPDAMVQPF
DEG_SIAH_1
0.6752
p.V44L
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
TPDAMVQPF
DEG_SIAH_1
0.0833
p.P34L
CRO-AP3
NS
COSMIC
TPDAMVQPF
DEG_SIAH_1
0.7582
p.V24L
CESS
haematopoietic_and_lymphoid_tissue
COSMIC
TPDAMVQPF
DEG_SIAH_1
0.25
Drug responses associated with RBFOX2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPDAMVQPF
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43251
RNA binding protein fox-1 homolog 2
DEG_SIAH_1
27:35
TPDAMVQPF
SIAH1,SIAH2,SIAH3
0.5421
More...