DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPEDTPNK
Uniprot ID:
O43493
Source protein:
Trans-Golgi network integral membrane protein 2
Source gene:
TGOLN2
Class:
DEG_SCF_SKP2-CKS1_1
Location:
76:83
E3 ligase:
SKP2,CSK1
DEGRON score:
0.9934
ASA_SCORE:
107.5875
COIL:
0.9641
CONS_SCORE:
0.7302
DSS_SCORE:
0.8071
HELIX:
0.0245
FCONS_SCORE:
1.0127
RIG_SCORE:
0.5584
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K89N
TCGA-AX-A2HC
UCEC
TCGA
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.2778
p.K89N
DO41572
UCEC
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.2778
p.S71C
TCGA-AZ-5407
COAD
TCGA
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6389
p.S71C
DO8432
COAD
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6389
p.S68N
TCGA-B5-A1MX
UCEC
TCGA
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5556
p.S68N
DO41999
UCEC
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5556
p.D79N
TCGA-CV-7242
HNSC
TCGA
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5821
p.D79N
DO14974
HNSC
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5821
p.K83R
DO227432
EOPC
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.7237
p.K83R
DO228924
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.7237
p.K83R
DO228941
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.7237
p.K83R
DO228899
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.7237
p.S70W
DO222771
ESCA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6111
p.S70W
ACH-001413
Bladder Cancer
CCLE
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6111
p.T80S
DO228922
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.8227
p.T80S
DO228933
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.8227
p.T80S
DO228936
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.8227
p.T80S
DO228940
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.8227
p.P67T
DO228986
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.0833
p.N82K
DO229018
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5806
p.S68R
DO229031
LICA
ICGC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.5556
p.D93G
SIDM00262
Ewing's Sarcoma
GDSC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.0556
p.D93G
ES6
bone
COSMIC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.0556
p.N82H
SIDM01051
Ovarian Carcinoma
GDSC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6312
p.N82H
ACH-000936
Ovarian Cancer
CCLE
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6312
p.N82H
EFO-27
ovary
COSMIC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.6312
p.K92E
ES6
bone
COSMIC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.1944
p.Q91P
ES6
bone
COSMIC
TPEDTPNK
DEG_SCF_SKP2-CKS1_1
0.1111
Drug responses associated with TGOLN2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPEDTPNK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43493
Trans-Golgi network integral membrane protein 2
DEG_SCF_SKP2-CKS1_1
76:83
TPEDTPNK
SKP2,CSK1
0.9934
More...