DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPETLVPTA
Uniprot ID:
Q14676
Source protein:
Mediator of DNA damage checkpoint protein 1
Source gene:
MDC1
Class:
DEG_COP1_1
Location:
1403:1411
E3 ligase:
COP1
DEGRON score:
0.9714
ASA_SCORE:
98.9667
COIL:
0.9536
CONS_SCORE:
0.3516
DSS_SCORE:
0.7823
HELIX:
0.0132
FCONS_SCORE:
0.9767
RIG_SCORE:
0.6371
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1415K
TCGA-AG-A002
READ
TCGA
TPETLVPTA
DEG_COP1_1
0.2222
p.G1401C
TCGA-CN-6010
HNSC
TCGA
TPETLVPTA
DEG_COP1_1
0.2778
p.N1397H
TCGA-D1-A16Y
UCEC
TCGA
TPETLVPTA
DEG_COP1_1
0.1667
p.R1395I
TCGA-F5-6814
READ
TCGA
TPETLVPTA
DEG_COP1_1
0.1111
p.N1397I
TCGA-F7-A61S
HNSC
TCGA
TPETLVPTA
DEG_COP1_1
0.1667
p.T1400S
DO228483
BRCA
ICGC
TPETLVPTA
DEG_COP1_1
0.6944
p.T1400S
DO230659
LAML
ICGC
TPETLVPTA
DEG_COP1_1
0.6944
p.T1400S
DO231140
LAML
ICGC
TPETLVPTA
DEG_COP1_1
0.6944
p.L1396F
DO2198
BRCA
ICGC
TPETLVPTA
DEG_COP1_1
0.25
p.S1394F
DO49976
CESC
ICGC
TPETLVPTA
DEG_COP1_1
0.0833
p.V1406I
DO47925
STAD
ICGC
TPETLVPTA
DEG_COP1_1
0.7076
p.V1408L
ACH-002019
Cervical Cancer
CCLE
TPETLVPTA
DEG_COP1_1
0.6765
Drug responses associated with MDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPETLVPTA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14676
Mediator of DNA damage checkpoint protein 1
DEG_COP1_1
1403:1411
TPETLVPTA
COP1
0.9714
More...