DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPKTHSVPSA
Uniprot ID:
Q6ULP2
Source protein:
Aftiphilin
Source gene:
AFTPH
Class:
DEG_COP1_1
Location:
617:626
E3 ligase:
COP1
DEGRON score:
0.9926
ASA_SCORE:
80.21
COIL:
0.8386
CONS_SCORE:
0.4096
DSS_SCORE:
0.7031
HELIX:
0.0891
FCONS_SCORE:
1.0239
RIG_SCORE:
0.6184
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D613H
TCGA-63-5131
LUSC
TCGA
TPKTHSVPSA
DEG_COP1_1
0.2222
p.D613H
DO26898
LUSC
ICGC
TPKTHSVPSA
DEG_COP1_1
0.2222
p.T620M
TCGA-AJ-A5DW
UCEC
TCGA
TPKTHSVPSA
DEG_COP1_1
0.7423
p.T620M
DO50075
UCEC
ICGC
TPKTHSVPSA
DEG_COP1_1
0.7423
p.G635V
DO229045
LICA
ICGC
TPKTHSVPSA
DEG_COP1_1
0.0833
p.T614I
DO232224
PBCA
ICGC
TPKTHSVPSA
DEG_COP1_1
0.6944
p.P624L
SIDM00727
Non-Small Cell Lung Carcinoma
GDSC
TPKTHSVPSA
DEG_COP1_1
0.7582
p.P624L
ACH-000951
Lung Cancer
CCLE
TPKTHSVPSA
DEG_COP1_1
0.7582
p.P624L
NCI-H2342
lung
COSMIC
TPKTHSVPSA
DEG_COP1_1
0.7582
p.H636R
SIDM01450
Gastric Carcinoma
GDSC
TPKTHSVPSA
DEG_COP1_1
0.0556
Drug responses associated with AFTPH mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPKTHSVPSA
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6ULP2
Aftiphilin
DEG_COP1_1
617:626
TPKTHSVPSA
COP1
0.9926
More...