DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPQAEVGPT
Uniprot ID:
P35520
Source protein:
Cystathionine beta-synthase
Source gene:
CBS
Class:
DEG_SIAH_1
Location:
5:13
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9275
ASA_SCORE:
87.5667
COIL:
0.8682
CONS_SCORE:
0.2633
DSS_SCORE:
0.8503
HELIX:
0.0842
FCONS_SCORE:
0.9884
RIG_SCORE:
0.5846
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R18C
TCGA-D1-A17D
UCEC
TCGA
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18C
DO52365
LUSC
ICGC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18C
DO41746
UCEC
ICGC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18C
CTB-1
haematopoietic_and_lymphoid_tissue
COSMIC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18H
TCGA-SJ-A6ZI
UCEC
TCGA
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18H
DO230318
COCA
ICGC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18H
DO219784
UCEC
ICGC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18H
ACH-001369
Ovarian Cancer
CCLE
TPQAEVGPT
DEG_SIAH_1
0.1944
p.E16D
DO6470
CLLE
ICGC
TPQAEVGPT
DEG_SIAH_1
0.25
p.G12S
DO7828
COAD
ICGC
TPQAEVGPT
DEG_SIAH_1
0.6993
p.L17I
DO220312
SARC
ICGC
TPQAEVGPT
DEG_SIAH_1
0.2222
p.R18S
ACH-000916
Lung Cancer
CCLE
TPQAEVGPT
DEG_SIAH_1
0.1944
p.R18S
NCI-H1573
lung
COSMIC
TPQAEVGPT
DEG_SIAH_1
0.1944
p.P6S
ACH-000996
Endometrial/Uterine Cancer
CCLE
TPQAEVGPT
DEG_SIAH_1
0.6752
Drug responses associated with CBS mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPQAEVGPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P35520
Cystathionine beta-synthase
DEG_SIAH_1
5:13
TPQAEVGPT
SIAH1,SIAH2,SIAH3
0.9275
More...