DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPSALVSPS
Uniprot ID:
Q8N9L1
Source protein:
Zinc finger protein ZIC 4
Source gene:
ZIC4
Class:
DEG_SIAH_1
Location:
302:310
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9873
ASA_SCORE:
70.5
COIL:
0.8686
CONS_SCORE:
0.5235
DSS_SCORE:
0.5493
HELIX:
0.0674
FCONS_SCORE:
0.9057
RIG_SCORE:
0.6237
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D300E
TCGA-37-4130
LUSC
TCGA
TPSALVSPS
DEG_SIAH_1
0.2778
p.F295L
TCGA-55-1592
LUAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.1389
p.T309N
TCGA-64-5775
LUAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.7055
p.F295C
TCGA-66-2742
LUSC
TCGA
TPSALVSPS
DEG_SIAH_1
0.1389
p.D300Y
TCGA-86-7701
LUAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.2778
p.R301H
TCGA-99-7458
LUAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.3056
p.R301H
SIDM00933
Breast Carcinoma
GDSC
TPSALVSPS
DEG_SIAH_1
0.3056
p.R301H
CAL-51
breast
COSMIC
TPSALVSPS
DEG_SIAH_1
0.3056
p.R301C
TCGA-A5-A0G2
UCEC
TCGA
TPSALVSPS
DEG_SIAH_1
0.3056
p.R294C
TCGA-AA-3680
COAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.1111
p.R294C
TCGA-RD-A8N6
STAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.1111
p.S305L
TCGA-AA-3984
COAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.7667
p.S305L
TCGA-AA-A010
COAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.7667
p.R294H
TCGA-AD-6889
COAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.1111
p.R294H
SIDM00068
Colorectal Carcinoma
GDSC
TPSALVSPS
DEG_SIAH_1
0.1111
p.R294H
GEO
large_intestine
COSMIC
TPSALVSPS
DEG_SIAH_1
0.1111
p.V307M
TCGA-CV-A6JY
HNSC
TCGA
TPSALVSPS
DEG_SIAH_1
0.7208
p.H306Q
TCGA-D1-A17T
UCEC
TCGA
TPSALVSPS
DEG_SIAH_1
0.7582
p.D300N
TCGA-D3-A2JF
SKCM
TCGA
TPSALVSPS
DEG_SIAH_1
0.2778
p.D300N
TCGA-FW-A3R5
SKCM
TCGA
TPSALVSPS
DEG_SIAH_1
0.2778
p.R301S
TCGA-DA-A1IB
SKCM
TCGA
TPSALVSPS
DEG_SIAH_1
0.3056
p.R293Q
TCGA-VQ-A91K
STAD
TCGA
TPSALVSPS
DEG_SIAH_1
0.0833
p.D311E
SIDM00502
B-Lymphoblastic Leukemia
GDSC
TPSALVSPS
DEG_SIAH_1
0.3056
p.R293W
SIDM00217
Colorectal Carcinoma
GDSC
TPSALVSPS
DEG_SIAH_1
0.0833
p.R293W
SNU-1040
large_intestine
COSMIC
TPSALVSPS
DEG_SIAH_1
0.0833
p.T315A
SIDM00170
Head and Neck Carcinoma
GDSC
TPSALVSPS
DEG_SIAH_1
0.1944
p.R319W
SIDM01611
Endometrial Carcinoma
GDSC
TPSALVSPS
DEG_SIAH_1
0.0833
p.P303L
EN
endometrium
COSMIC
TPSALVSPS
DEG_SIAH_1
0.7582
p.R320S
NCI-H847
lung
COSMIC
TPSALVSPS
DEG_SIAH_1
0.0556
p.R320H
OCUB-M
breast
COSMIC
TPSALVSPS
DEG_SIAH_1
0.0556
p.T314S
KARPAS-45
haematopoietic_and_lymphoid_tissue
COSMIC
TPSALVSPS
DEG_SIAH_1
0.2222
Drug responses associated with ZIC4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPSALVSPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N9L1
Zinc finger protein ZIC 4
DEG_SIAH_1
302:310
TPSALVSPS
SIAH1,SIAH2,SIAH3
0.9873
More...