DegronMD: protein-targeted degradation, mutation and drug response to degrons
Home
(current)
Browse
Proteins/Degrons
Mutations
Drug response
Network-rewiring
Drug resistance
Search
Tutorial
Download
Contact
Links
BSML
CPH
CGC
Degron:
TPSSSPVPTL
Uniprot ID:
Q9UBU9
Source protein:
Nuclear RNA export factor 1
Source gene:
NXF1
Class:
DEG_COP1_1
Location:
554:563
E3 ligase:
COP1
DEGRON score:
0.9766
ASA_SCORE:
78.31
COIL:
0.948
CONS_SCORE:
0.4151
DSS_SCORE:
0.6713
HELIX:
0.0225
FCONS_SCORE:
1.0877
RIG_SCORE:
0.5812
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R546I
TCGA-A5-A1OF
UCEC
TCGA
TPSSSPVPTL
DEG_COP1_1
0.1111
p.R546I
DO42568
UCEC
ICGC
TPSSSPVPTL
DEG_COP1_1
0.1111
p.A549T
TCGA-B5-A3FC
UCEC
TCGA
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A549T
TCGA-OR-A5J5
ACC
TCGA
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A549T
DO41871
UCEC
ICGC
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A549T
SIDM00145
T-Lymphoblastic Leukemia
GDSC
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A549T
ACH-001127
Leukemia
CCLE
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A549T
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
TPSSSPVPTL
DEG_COP1_1
0.1944
p.A573T
TCGA-FI-A2D5
UCEC
TCGA
TPSSSPVPTL
DEG_COP1_1
0.0556
p.A573T
DO41331
UCEC
ICGC
TPSSSPVPTL
DEG_COP1_1
0.0556
p.P561S
TCGA-PJ-A8JU
KIRP
TCGA
TPSSSPVPTL
DEG_COP1_1
0.6752
p.P561S
DO48523
KIRP
ICGC
TPSSSPVPTL
DEG_COP1_1
0.6752
p.S558R
DO49675
LIAD
ICGC
TPSSSPVPTL
DEG_COP1_1
0.7427
p.S558R
DO22802
LICA
ICGC
TPSSSPVPTL
DEG_COP1_1
0.7427
p.Q572K
DO228974
LICA
ICGC
TPSSSPVPTL
DEG_COP1_1
0.0833
p.S564F
SIDM01300
Colorectal Carcinoma
GDSC
TPSSSPVPTL
DEG_COP1_1
0.75
p.P555S
SIDM00999
Bladder Carcinoma
GDSC
TPSSSPVPTL
DEG_COP1_1
0.5641
p.P555S
ACH-000973
Bladder Cancer
CCLE
TPSSSPVPTL
DEG_COP1_1
0.5641
p.P555S
639-V
urinary_tract
COSMIC
TPSSSPVPTL
DEG_COP1_1
0.5641
Drug responses associated with NXF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPSSSPVPTL
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UBU9
Nuclear RNA export factor 1
DEG_COP1_1
554:563
TPSSSPVPTL
COP1
0.9766
More...