DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TPTGPVPDP
Uniprot ID:
Q99501
Source protein:
GAS2-like protein 1
Source gene:
GAS2L1
Class:
DEG_COP1_1
Location:
539:547
E3 ligase:
COP1
DEGRON score:
0.9928
ASA_SCORE:
94.6556
COIL:
0.9621
CONS_SCORE:
0.299
DSS_SCORE:
0.6195
HELIX:
0.017
FCONS_SCORE:
0.8009
RIG_SCORE:
0.617
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L532F
DO52079
HNSC
ICGC
TPTGPVPDP
DEG_COP1_1
0.1389
p.L536P
DO46542
OV
ICGC
TPTGPVPDP
DEG_COP1_1
0.25
p.P531H
DO46542
OV
ICGC
TPTGPVPDP
DEG_COP1_1
0.1111
p.A555G
SIDM01298
Esophageal Carcinoma
GDSC
TPTGPVPDP
DEG_COP1_1
0.1111
p.A550V
SIDM01004
Chronic Myelogenous Leukemia
GDSC
TPTGPVPDP
DEG_COP1_1
0.25
p.A550V
KCL-22
haematopoietic_and_lymphoid_tissue
COSMIC
TPTGPVPDP
DEG_COP1_1
0.25
p.R530W
SIDM00050
Chondrosarcoma
GDSC
TPTGPVPDP
DEG_COP1_1
0.0833
p.R530W
CHSA0108
bone
COSMIC
TPTGPVPDP
DEG_COP1_1
0.0833
p.P543A
SIDM00951
T-Lymphoblastic Leukemia
GDSC
TPTGPVPDP
DEG_COP1_1
0.6392
p.P543A
CTV-1
haematopoietic_and_lymphoid_tissue
COSMIC
TPTGPVPDP
DEG_COP1_1
0.6392
Drug responses associated with GAS2L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TPTGPVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99501
GAS2-like protein 1
DEG_COP1_1
539:547
TPTGPVPDP
COP1
0.9928
More...