DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TQVTVLDVPDP
Uniprot ID:
O00533
Source protein:
Neural cell adhesion molecule L1-like protein
Source gene:
CHL1
Class:
DEG_COP1_1
Location:
604:614
E3 ligase:
COP1
DEGRON score:
0.8156
ASA_SCORE:
53.7455
COIL:
0.5305
CONS_SCORE:
0.6396
DSS_SCORE:
0.4104
HELIX:
0.0085
FCONS_SCORE:
1.11
RIG_SCORE:
0.8021
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G603S
TCGA-17-Z049
LUAD
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.S595Y
TCGA-55-5899
LUAD
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.0833
p.S595Y
DO26042
LUAD
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.0833
p.S595Y
SIDM01588
Endometrial Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.0833
p.S595Y
ACH-000993
Endometrial/Uterine Cancer
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.0833
p.G603V
TCGA-56-7223
LUSC
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.G603V
TCGA-56-8626
LUSC
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.G603V
DO26999
LUSC
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.G603V
DO45506
LUSC
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.D618N
TCGA-A5-A2K5
UCEC
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
TCGA-D1-A16Y
UCEC
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
TCGA-GN-A4U4
SKCM
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
DO222363
MELA
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
DO51256
SKCM
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
DO41524
UCEC
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
DO41379
UCEC
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
SIDM00118
Colorectal Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
ACH-001081
Colon/Colorectal Cancer
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D618N
HCC2998
large_intestine
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.I594V
TCGA-AD-6964
COAD
TCGA
TQVTVLDVPDP
DEG_COP1_1
0.0556
p.I594V
DO8360
COAD
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.0556
p.C607F
DO229038
LICA
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.7108
p.L613P
DO229453
SKCA
ICGC
TQVTVLDVPDP
DEG_COP1_1
0.7582
p.V622I
SIDM00551
Esophageal Squamous Cell Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.1111
p.V622I
ACH-002263
Esophageal Cancer
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.1111
p.V622I
KYSE-220
oesophagus
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.1111
p.E600D
SIDM00889
Cervical Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.E600D
SIDM00683
Prostate Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.E600D
ACH-000977
lymph_node
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.E600D
ACH-001333
Cervical Cancer
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.E600D
LNCaP-Clone-FGC
prostate
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.E600D
C-33-A
cervix
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.H610Y
SIDM01628
Non-Small Cell Lung Carcinoma
GDSC
TQVTVLDVPDP
DEG_COP1_1
0.7229
p.H610Y
ACH-000851
Lung Cancer
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.7229
p.E600G
ACH-001618
Leukemia
CCLE
TQVTVLDVPDP
DEG_COP1_1
0.2222
p.D602N
HCC2998
large_intestine
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.2778
p.P612L
IPC-298
skin
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.7582
p.V606I
KYSE-220
oesophagus
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.5965
p.P615Q
OSC-19
upper_aerodigestive_tract
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.3056
p.E616K
NB5
autonomic_ganglia
COSMIC
TQVTVLDVPDP
DEG_COP1_1
0.2778
Drug responses associated with CHL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TQVTVLDVPDP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O00533
Neural cell adhesion molecule L1-like protein
DEG_COP1_1
604:614
TQVTVLDVPDP
COP1
0.8156
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