DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRAELVAIS
Uniprot ID:
Q9UPN3
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
Source gene:
MACF1
Class:
DEG_APCC_DBOX_1
Location:
570:578
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.83
ASA_SCORE:
71.7444
COIL:
0.2132
CONS_SCORE:
0.2879
DSS_SCORE:
0.3454
HELIX:
0.7768
FCONS_SCORE:
0.8976
RIG_SCORE:
0.8017
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S560A
TCGA-A5-A0G2
UCEC
TCGA
TRAELVAIS
DEG_APCC_DBOX_1
0.5
p.S560A
DO41235
UCEC
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.5
p.R587Q
TCGA-CD-A4MI
STAD
TCGA
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.R587Q
DO47717
STAD
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.R587Q
SIDM00472
Ovarian Carcinoma
GDSC
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.R587Q
ACH-001630
Ovarian Cancer
CCLE
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.R587Q
PEO1
ovary
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.R566Q
TCGA-EE-A29M
SKCM
TCGA
TRAELVAIS
DEG_APCC_DBOX_1
0.2222
p.R566Q
DO37404
SKCM
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.2222
p.P568S
DO11854
GBM
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.2778
p.V575L
DO229038
LICA
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.5654
p.R587L
DO229037
LICA
ICGC
TRAELVAIS
DEG_APCC_DBOX_1
0.0833
p.T562N
SIDM01028
Esophageal Squamous Cell Carcinoma
GDSC
TRAELVAIS
DEG_APCC_DBOX_1
0.1111
p.T562N
ACH-000809
Esophageal Cancer
CCLE
TRAELVAIS
DEG_APCC_DBOX_1
0.1111
p.T562N
KYSE-410
oesophagus
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.1111
p.R571W
SIDM00511
Small Cell Lung Carcinoma
GDSC
TRAELVAIS
DEG_APCC_DBOX_1
0.8634
p.R571W
ACH-000257
Lung Cancer
CCLE
TRAELVAIS
DEG_APCC_DBOX_1
0.8634
p.R571W
COR-L279
lung
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.8634
p.R566W
COR-L279
lung
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.2222
p.L569S
CW-2
large_intestine
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.3056
p.R582Q
PEO1
ovary
COSMIC
TRAELVAIS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRAELVAIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UPN3
Microtubule-actin cross-linking factor 1, isoforms 1/2/3/4/5
DEG_APCC_DBOX_1
570:578
TRAELVAIS
APC,CDC20,FZR1
0.83
More...