DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRAKLDELS
Uniprot ID:
Q9UQE7
Source protein:
Structural maintenance of chromosomes protein 3
Source gene:
SMC3
Class:
DEG_APCC_DBOX_1
Location:
235:243
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8099
ASA_SCORE:
74.3333
COIL:
0.0216
CONS_SCORE:
0.336
DSS_SCORE:
0.4705
HELIX:
0.9789
FCONS_SCORE:
1.0332
RIG_SCORE:
0.7653
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q230E
TCGA-06-0645
GBM
TCGA
TRAKLDELS
DEG_APCC_DBOX_1
0.1944
p.Q230E
DO13881
GBM
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.1944
p.R236H
TCGA-A5-A0G2
UCEC
TCGA
TRAKLDELS
DEG_APCC_DBOX_1
0.8244
p.R236H
DO41235
UCEC
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.8244
p.S243Y
TCGA-A5-A0G2
UCEC
TCGA
TRAKLDELS
DEG_APCC_DBOX_1
0.712
p.S243Y
DO41235
UCEC
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.712
p.T235I
TCGA-AX-A06F
UCEC
TCGA
TRAKLDELS
DEG_APCC_DBOX_1
0.5966
p.T235I
DO41752
UCEC
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.5966
p.S243C
TCGA-E5-A4U1
BLCA
TCGA
TRAKLDELS
DEG_APCC_DBOX_1
0.7541
p.S243C
DO44061
BLCA
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.7541
p.R236L
DO229019
LICA
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.8428
p.R236L
DO229029
LICA
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.8428
p.E247G
DO35216
PACA
ICGC
TRAKLDELS
DEG_APCC_DBOX_1
0.2222
Drug responses associated with SMC3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRAKLDELS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UQE7
Structural maintenance of chromosomes protein 3
DEG_APCC_DBOX_1
235:243
TRAKLDELS
APC,CDC20,FZR1
0.8099
More...