DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
TRFILSKVP
Uniprot ID:
Q9H1V8
Source protein:
Sodium-dependent neutral amino acid transporter SLC6A17
Source gene:
SLC6A17
Class:
DEG_APCC_DBOX_1
Location:
673:681
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.806
ASA_SCORE:
83.6444
COIL:
0.5634
CONS_SCORE:
0.2842
DSS_SCORE:
0.5593
HELIX:
0.4079
FCONS_SCORE:
0.9581
RIG_SCORE:
0.7615
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D671N
TCGA-AP-A056
UCEC
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.2778
p.D671N
DO43971
UCEC
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.2778
p.A684V
TCGA-AX-A0J1
UCEC
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.25
p.A684V
DO41199
UCEC
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.25
p.R674H
TCGA-CV-A45V
HNSC
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.8244
p.R674H
DO52059
HNSC
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.8244
p.R674H
SIDM00451
T-Lymphoblastic Leukemia
GDSC
TRFILSKVP
DEG_APCC_DBOX_1
0.8244
p.R674H
ACH-000937
Leukemia
CCLE
TRFILSKVP
DEG_APCC_DBOX_1
0.8244
p.R674H
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
TRFILSKVP
DEG_APCC_DBOX_1
0.8244
p.R674S
TCGA-D3-A1Q3
SKCM
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.7427
p.R674S
DO47509
SKCM
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.7427
p.R674C
TCGA-D9-A4Z3
SKCM
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.8301
p.R674C
DO47555
SKCM
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.8301
p.P685S
TCGA-DD-A1EK
LIHC
TCGA
TRFILSKVP
DEG_APCC_DBOX_1
0.2222
p.P685S
DO48492
LIHC
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.2222
p.P685S
SIDM00335
Endometrial Carcinoma
GDSC
TRFILSKVP
DEG_APCC_DBOX_1
0.2222
p.P685S
MFE-280
endometrium
COSMIC
TRFILSKVP
DEG_APCC_DBOX_1
0.2222
p.A684T
DO231186
LUSC
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.25
p.P687L
DO222731
MELA
ICGC
TRFILSKVP
DEG_APCC_DBOX_1
0.1667
p.S682N
SIDM01088
Endometrial Carcinoma
GDSC
TRFILSKVP
DEG_APCC_DBOX_1
0.75
p.S682N
ACH-000965
Endometrial/Uterine Cancer
CCLE
TRFILSKVP
DEG_APCC_DBOX_1
0.75
p.S682N
RL95-2
endometrium
COSMIC
TRFILSKVP
DEG_APCC_DBOX_1
0.75
p.S678N
SUP-T1
haematopoietic_and_lymphoid_tissue
COSMIC
TRFILSKVP
DEG_APCC_DBOX_1
0.5958
Drug responses associated with SLC6A17 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRFILSKVP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9H1V8
Sodium-dependent neutral amino acid transporter SLC6A17
DEG_APCC_DBOX_1
673:681
TRFILSKVP
APC,CDC20,FZR1
0.806
More...