DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
TRFRLDMLK
Uniprot ID:
Q86TI0
Source protein:
TBC1 domain family member 1
Source gene:
TBC1D1
Class:
DEG_APCC_DBOX_1
Location:
489:497
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.774
ASA_SCORE:
97.1889
COIL:
0.3298
CONS_SCORE:
0.3201
DSS_SCORE:
0.4924
HELIX:
0.6574
FCONS_SCORE:
0.7893
RIG_SCORE:
0.8028
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K501E
TCGA-AX-A06F
UCEC
TCGA
TRFRLDMLK
DEG_APCC_DBOX_1
0.3333
p.K501E
DO41752
UCEC
ICGC
TRFRLDMLK
DEG_APCC_DBOX_1
0.3333
p.N479H
TCGA-AX-A0J0
UCEC
TCGA
TRFRLDMLK
DEG_APCC_DBOX_1
0.0556
p.N479H
DO41133
UCEC
ICGC
TRFRLDMLK
DEG_APCC_DBOX_1
0.0556
p.F491V
TCGA-BR-8687
STAD
TCGA
TRFRLDMLK
DEG_APCC_DBOX_1
0.5957
p.F491V
DO47801
STAD
ICGC
TRFRLDMLK
DEG_APCC_DBOX_1
0.5957
p.S503Y
TCGA-ND-A4WC
UCS
TCGA
TRFRLDMLK
DEG_APCC_DBOX_1
0.6111
p.K499E
SIDM01199
Hepatocellular Carcinoma
GDSC
TRFRLDMLK
DEG_APCC_DBOX_1
0.2778
p.K499E
SNU-423
liver
COSMIC
TRFRLDMLK
DEG_APCC_DBOX_1
0.2778
p.R502T
SIDM00114
Non-Small Cell Lung Carcinoma
GDSC
TRFRLDMLK
DEG_APCC_DBOX_1
0.1944
p.R502T
H513
pleura
COSMIC
TRFRLDMLK
DEG_APCC_DBOX_1
0.1944
p.R492S
SIDM00420
Bladder Carcinoma
GDSC
TRFRLDMLK
DEG_APCC_DBOX_1
0.6316
p.R492S
ACH-000566
Bladder Cancer
CCLE
TRFRLDMLK
DEG_APCC_DBOX_1
0.6316
p.R492S
SW1710
urinary_tract
COSMIC
TRFRLDMLK
DEG_APCC_DBOX_1
0.6316
p.L504V
SIDM00145
T-Lymphoblastic Leukemia
GDSC
TRFRLDMLK
DEG_APCC_DBOX_1
0.1389
p.L504V
MOLT-4
haematopoietic_and_lymphoid_tissue
COSMIC
TRFRLDMLK
DEG_APCC_DBOX_1
0.1389
p.N479Y
SIDM01582
Gastric Carcinoma
GDSC
TRFRLDMLK
DEG_APCC_DBOX_1
0.0556
p.N479Y
ACH-000507
Gastric Cancer
CCLE
TRFRLDMLK
DEG_APCC_DBOX_1
0.0556
Drug responses associated with TBC1D1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRFRLDMLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q86TI0
TBC1 domain family member 1
DEG_APCC_DBOX_1
489:497
TRFRLDMLK
APC,CDC20,FZR1
0.774
More...