DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRFTLTGLK
Uniprot ID:
P10586
Source protein:
Receptor-type tyrosine-protein phosphatase F
Source gene:
PTPRF
Class:
DEG_APCC_DBOX_1
Location:
971:979
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.837
ASA_SCORE:
51.4889
COIL:
0.4334
CONS_SCORE:
0.4061
DSS_SCORE:
0.3248
HELIX:
0.0096
FCONS_SCORE:
0.8694
RIG_SCORE:
0.8395
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R989H
TCGA-A5-A0G2
UCEC
TCGA
TRFTLTGLK
DEG_APCC_DBOX_1
0.0556
p.R989H
DO233156
GACA
ICGC
TRFTLTGLK
DEG_APCC_DBOX_1
0.0556
p.R989H
DO41235
UCEC
ICGC
TRFTLTGLK
DEG_APCC_DBOX_1
0.0556
p.D985V
TCGA-B5-A3FA
UCEC
TCGA
TRFTLTGLK
DEG_APCC_DBOX_1
0.1667
p.D985V
DO52402
UCEC
ICGC
TRFTLTGLK
DEG_APCC_DBOX_1
0.1667
p.D970H
TCGA-CV-7427
HNSC
TCGA
TRFTLTGLK
DEG_APCC_DBOX_1
0.3056
p.D970H
DO14286
HNSC
ICGC
TRFTLTGLK
DEG_APCC_DBOX_1
0.3056
p.T983I
TCGA-CV-7568
HNSC
TCGA
TRFTLTGLK
DEG_APCC_DBOX_1
0.2222
p.T983I
DO14160
HNSC
ICGC
TRFTLTGLK
DEG_APCC_DBOX_1
0.2222
p.Q965P
SIDM00683
Prostate Carcinoma
GDSC
TRFTLTGLK
DEG_APCC_DBOX_1
0.1667
p.D985H
SIDM00311
Mesothelioma
GDSC
TRFTLTGLK
DEG_APCC_DBOX_1
0.1667
p.D985H
H2810
pleura
COSMIC
TRFTLTGLK
DEG_APCC_DBOX_1
0.1667
p.D976H
H2810
pleura
COSMIC
TRFTLTGLK
DEG_APCC_DBOX_1
0.7688
Drug responses associated with PTPRF mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRFTLTGLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P10586
Receptor-type tyrosine-protein phosphatase F
DEG_APCC_DBOX_1
971:979
TRFTLTGLK
APC,CDC20,FZR1
0.837
More...