DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
TRGPLCSLR
Uniprot ID:
Q9HC62
Source protein:
Sentrin-specific protease 2
Source gene:
SENP2
Class:
DEG_APCC_DBOX_1
Location:
278:286
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9989
ASA_SCORE:
81.9889
COIL:
0.7928
CONS_SCORE:
0.2602
DSS_SCORE:
0.356
HELIX:
0.1123
FCONS_SCORE:
1.0219
RIG_SCORE:
0.7905
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.C283Y
TCGA-DU-6392
LGG
TCGA
TRGPLCSLR
DEG_APCC_DBOX_1
0.5976
p.R279K
TCGA-EE-A3J8
SKCM
TCGA
TRGPLCSLR
DEG_APCC_DBOX_1
0.7237
p.R279S
DO7388
CLLE
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.7427
p.R280Q
DO233245
GACA
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.7329
p.P268L
DO233805
GACA
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.0556
p.V285L
DO229037
LICA
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.6765
p.P268S
DO51258
SKCM
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.0556
p.Q290K
DO47753
STAD
ICGC
TRGPLCSLR
DEG_APCC_DBOX_1
0.2222
p.K271E
SIDM00298
Squamous Cell Lung Carcinoma
GDSC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
p.K271E
SIDM01217
Other Blood Cancers
GDSC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
p.K271E
SIDM01608
Endometrial Carcinoma
GDSC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
p.K271E
SIDM01454
Kidney Carcinoma
GDSC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
p.K271E
LC-1-sq
lung
COSMIC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
p.K271E
MY-M12
haematopoietic_and_lymphoid_tissue
COSMIC
TRGPLCSLR
DEG_APCC_DBOX_1
0.5833
Drug responses associated with SENP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRGPLCSLR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9HC62
Sentrin-specific protease 2
DEG_APCC_DBOX_1
278:286
TRGPLCSLR
APC,CDC20,FZR1
0.9989
More...