DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRGPLNPLP
Uniprot ID:
Q9NS62
Source protein:
Thrombospondin type-1 domain-containing protein 1
Source gene:
THSD1
Class:
DEG_APCC_DBOX_1
Location:
718:726
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.992
ASA_SCORE:
79.9
COIL:
0.8986
CONS_SCORE:
0.4266
DSS_SCORE:
0.6229
HELIX:
0.0394
FCONS_SCORE:
0.9192
RIG_SCORE:
0.6294
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A715V
TCGA-B5-A3FC
UCEC
TCGA
TRGPLNPLP
DEG_APCC_DBOX_1
0.25
p.L709M
TCGA-D1-A103
UCEC
TCGA
TRGPLNPLP
DEG_APCC_DBOX_1
0.0833
p.P726S
TCGA-EE-A20H
SKCM
TCGA
TRGPLNPLP
DEG_APCC_DBOX_1
0.5641
p.P726S
TCGA-EE-A3J4
SKCM
TCGA
TRGPLNPLP
DEG_APCC_DBOX_1
0.5641
p.P724H
TCGA-FP-A4BE
STAD
TCGA
TRGPLNPLP
DEG_APCC_DBOX_1
0.6583
p.Q733K
SIDM01144
Gastric Carcinoma
GDSC
TRGPLNPLP
DEG_APCC_DBOX_1
0.1389
p.Q733K
ACH-000303
Gastric Cancer
CCLE
TRGPLNPLP
DEG_APCC_DBOX_1
0.1389
p.Q733K
NCI-SNU-5
stomach
COSMIC
TRGPLNPLP
DEG_APCC_DBOX_1
0.1389
p.S716G
SIDM00566
Oral Cavity Carcinoma
GDSC
TRGPLNPLP
DEG_APCC_DBOX_1
0.2778
p.S716G
ACH-001625
Head and Neck Cancer
CCLE
TRGPLNPLP
DEG_APCC_DBOX_1
0.2778
p.S716G
OSC-19
upper_aerodigestive_tract
COSMIC
TRGPLNPLP
DEG_APCC_DBOX_1
0.2778
p.S736Y
CW-2
large_intestine
COSMIC
TRGPLNPLP
DEG_APCC_DBOX_1
0.0556
Drug responses associated with THSD1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRGPLNPLP
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9NS62
Thrombospondin type-1 domain-containing protein 1
DEG_APCC_DBOX_1
718:726
TRGPLNPLP
APC,CDC20,FZR1
0.992
More...