DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRKELEEMI
Uniprot ID:
Q8TF05
Source protein:
Serine/threonine-protein phosphatase 4 regulatory subunit 1
Source gene:
PPP4R1
Class:
DEG_APCC_DBOX_1
Location:
503:511
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5356
ASA_SCORE:
76.1667
COIL:
0.093
CONS_SCORE:
0.3723
DSS_SCORE:
0.6121
HELIX:
0.9078
FCONS_SCORE:
0.986
RIG_SCORE:
0.7602
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N513T
TCGA-49-AARN
LUAD
TCGA
TRKELEEMI
DEG_APCC_DBOX_1
0.2778
p.P494S
TCGA-78-7539
LUAD
TCGA
TRKELEEMI
DEG_APCC_DBOX_1
0.0833
p.S521R
DO229019
LICA
ICGC
TRKELEEMI
DEG_APCC_DBOX_1
0.0556
p.N496T
DO218923
LUAD
ICGC
TRKELEEMI
DEG_APCC_DBOX_1
0.5833
p.E498D
DO229224
THCA
ICGC
TRKELEEMI
DEG_APCC_DBOX_1
0.1944
p.K507E
DO40900
UCEC
ICGC
TRKELEEMI
DEG_APCC_DBOX_1
0.7022
Drug responses associated with PPP4R1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRKELEEMI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TF05
Serine/threonine-protein phosphatase 4 regulatory subunit 1
DEG_APCC_DBOX_1
503:511
TRKELEEMI
APC,CDC20,FZR1
0.5356
More...