DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRKRLSTID
Uniprot ID:
Q8IW52
Source protein:
SLIT and NTRK-like protein 4
Source gene:
SLITRK4
Class:
DEG_APCC_DBOX_1
Location:
736:744
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5571
ASA_SCORE:
82.3333
COIL:
0.6257
CONS_SCORE:
0.4156
DSS_SCORE:
0.238
HELIX:
0.1508
FCONS_SCORE:
1.0628
RIG_SCORE:
0.8075
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D754G
TCGA-50-5935
LUAD
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D754G
DO23588
LUAD
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
TCGA-78-7155
LUAD
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
DO23590
LUAD
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
SIDM00630
Breast Carcinoma
GDSC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
SIDM01228
Melanoma
GDSC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
CHL-1
skin
COSMIC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726E
MDA-MB-415
breast
COSMIC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.T736N
TCGA-AP-A051
UCEC
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.7055
p.T736N
DO42673
UCEC
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.7055
p.T736N
SIDM00649
Non-Small Cell Lung Carcinoma
GDSC
TRKRLSTID
DEG_APCC_DBOX_1
0.7055
p.T736N
ACH-000510
Lung Cancer
CCLE
TRKRLSTID
DEG_APCC_DBOX_1
0.7055
p.T736N
NCI-H1299
lung
COSMIC
TRKRLSTID
DEG_APCC_DBOX_1
0.7055
p.K738N
TCGA-AP-A056
UCEC
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.5806
p.K738N
DO43971
UCEC
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.5806
p.D726N
TCGA-AP-A0LM
UCEC
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726N
TCGA-EY-A1GV
UCEC
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726N
DO43306
UCEC
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D726N
DO42785
UCEC
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.S741I
TCGA-AP-A1DV
UCEC
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.7341
p.S741I
DO43186
UCEC
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.7341
p.E728K
TCGA-BF-AAP4
SKCM
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.1111
p.E728K
DO219468
SKCM
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.1111
p.P751S
TCGA-GN-A266
SKCM
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.1389
p.P751S
DO37432
SKCM
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.1389
p.E745K
TCGA-PE-A5DE
BRCA
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.3056
p.E745K
DO219643
BRCA
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.3056
p.D754N
TCGA-W3-AA21
SKCM
TCGA
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.D754N
DO51278
SKCM
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.0556
p.L749F
DO220851
MELA
ICGC
TRKRLSTID
DEG_APCC_DBOX_1
0.1944
p.L749I
ACH-002002
Skin Cancer
CCLE
TRKRLSTID
DEG_APCC_DBOX_1
0.1944
Drug responses associated with SLITRK4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRKRLSTID
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IW52
SLIT and NTRK-like protein 4
DEG_APCC_DBOX_1
736:744
TRKRLSTID
APC,CDC20,FZR1
0.5571
More...