DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRMQLSKLV
Uniprot ID:
Q9Y467
Source protein:
Sal-like protein 2
Source gene:
SALL2
Class:
DEG_APCC_DBOX_1
Location:
546:554
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6928
ASA_SCORE:
89.6333
COIL:
0.6161
CONS_SCORE:
0.3873
DSS_SCORE:
0.3017
HELIX:
0.1731
FCONS_SCORE:
0.9981
RIG_SCORE:
0.8032
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R547C
TCGA-19-5956
GBM
TCGA
TRMQLSKLV
DEG_APCC_DBOX_1
0.8301
p.V539M
TCGA-D7-5578
STAD
TCGA
TRMQLSKLV
DEG_APCC_DBOX_1
0.1389
p.S551I
TCGA-VQ-AA6A
STAD
TCGA
TRMQLSKLV
DEG_APCC_DBOX_1
0.623
p.T564I
DO51867
BLCA
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.0556
p.A546T
DO219050
BLCA
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.7139
p.F563L
DO7783
COAD
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.0833
p.T564A
DO233767
GACA
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.0556
p.K562R
DO47801
STAD
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.1111
p.R538H
DO40978
UCEC
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.1111
p.R538H
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
TRMQLSKLV
DEG_APCC_DBOX_1
0.1111
p.S555F
DO41572
UCEC
ICGC
TRMQLSKLV
DEG_APCC_DBOX_1
0.3056
p.R547H
SIDM00455
Pancreatic Carcinoma
GDSC
TRMQLSKLV
DEG_APCC_DBOX_1
0.8244
p.R547H
ACH-000599
Pancreatic Cancer
CCLE
TRMQLSKLV
DEG_APCC_DBOX_1
0.8244
p.R547H
PA-TU-8902
pancreas
COSMIC
TRMQLSKLV
DEG_APCC_DBOX_1
0.8244
p.L563P
SIDM00330
Neuroblastoma
GDSC
TRMQLSKLV
DEG_APCC_DBOX_1
0.0833
p.L563P
ACH-001355
Neuroblastoma
CCLE
TRMQLSKLV
DEG_APCC_DBOX_1
0.0833
p.L563P
LAN-6
autonomic_ganglia
COSMIC
TRMQLSKLV
DEG_APCC_DBOX_1
0.0833
Drug responses associated with SALL2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRMQLSKLV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y467
Sal-like protein 2
DEG_APCC_DBOX_1
546:554
TRMQLSKLV
APC,CDC20,FZR1
0.6928
More...