DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRPALPSVS
Uniprot ID:
Q8IY67
Source protein:
Ribonucleoprotein PTB-binding 1
Source gene:
RAVER1
Class:
DEG_APCC_DBOX_1
Location:
556:564
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9655
ASA_SCORE:
85.9
COIL:
0.9454
CONS_SCORE:
0.2532
DSS_SCORE:
0.587
HELIX:
0.0259
FCONS_SCORE:
1.0533
RIG_SCORE:
0.6556
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P555A
TCGA-78-7150
LUAD
TCGA
TRPALPSVS
DEG_APCC_DBOX_1
0.3056
p.P555A
DO24411
LUAD
ICGC
TRPALPSVS
DEG_APCC_DBOX_1
0.3056
p.R553C
DO233088
GACA
ICGC
TRPALPSVS
DEG_APCC_DBOX_1
0.25
p.G550R
DO229029
LICA
ICGC
TRPALPSVS
DEG_APCC_DBOX_1
0.1667
p.R553H
DO228138
PBCA
ICGC
TRPALPSVS
DEG_APCC_DBOX_1
0.25
p.N562T
DO229133
THCA
ICGC
TRPALPSVS
DEG_APCC_DBOX_1
0.7055
p.G558A
SIDM02015
Colorectal Carcinoma
GDSC
TRPALPSVS
DEG_APCC_DBOX_1
0.754
p.A549T
SIDM01336
Glioblastoma
GDSC
TRPALPSVS
DEG_APCC_DBOX_1
0.1389
p.A549T
ACH-000368
Brain Cancer
CCLE
TRPALPSVS
DEG_APCC_DBOX_1
0.1389
p.R554H
ACH-002287
Colon/Colorectal Cancer
CCLE
TRPALPSVS
DEG_APCC_DBOX_1
0.2778
p.P564L
ACH-002309
Sarcoma
CCLE
TRPALPSVS
DEG_APCC_DBOX_1
0.7582
p.P564S
ACH-002309
Sarcoma
CCLE
TRPALPSVS
DEG_APCC_DBOX_1
0.6752
p.R557H
OVCAR-5
ovary
COSMIC
TRPALPSVS
DEG_APCC_DBOX_1
0.8244
p.P554A
SK-MEL-24
skin
COSMIC
TRPALPSVS
DEG_APCC_DBOX_1
0.2778
Drug responses associated with RAVER1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPALPSVS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY67
Ribonucleoprotein PTB-binding 1
DEG_APCC_DBOX_1
556:564
TRPALPSVS
APC,CDC20,FZR1
0.9655
More...