DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
TRPDLKNIS
Uniprot ID:
Q6UX15
Source protein:
Layilin
Source gene:
LAYN
Class:
DEG_APCC_DBOX_1
Location:
306:314
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8681
ASA_SCORE:
65.3333
COIL:
0.6493
CONS_SCORE:
0.3691
DSS_SCORE:
0.3817
HELIX:
0.2414
FCONS_SCORE:
0.9161
RIG_SCORE:
0.7866
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S314L
TCGA-21-1079
LUSC
TCGA
TRPDLKNIS
DEG_APCC_DBOX_1
0.6556
p.S314L
TCGA-DA-A1HV
SKCM
TCGA
TRPDLKNIS
DEG_APCC_DBOX_1
0.6556
p.S314L
DO26846
LUSC
ICGC
TRPDLKNIS
DEG_APCC_DBOX_1
0.6556
p.S314L
DO37659
SKCM
ICGC
TRPDLKNIS
DEG_APCC_DBOX_1
0.6556
p.R307W
TCGA-R5-A805
STAD
TCGA
TRPDLKNIS
DEG_APCC_DBOX_1
0.8634
p.R307L
DO229026
LICA
ICGC
TRPDLKNIS
DEG_APCC_DBOX_1
0.8428
p.R307Q
DO23549
LIRI
ICGC
TRPDLKNIS
DEG_APCC_DBOX_1
0.7329
p.R316Q
DO46790
PRAD
ICGC
TRPDLKNIS
DEG_APCC_DBOX_1
0.2778
Drug responses associated with LAYN mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of TRPDLKNIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6UX15
Layilin
DEG_APCC_DBOX_1
306:314
TRPDLKNIS
APC,CDC20,FZR1
0.8681
More...